RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 E9PMD0 336 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 CYP11B2P19099 503 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 FOXD4L6Q3SYB3 417 aaPredicted RBP20.86■□□□□ 0.93
MBD1-223ENST00000590215 FOXD4L3Q6VB84 417 aaPredicted RBP20.86■□□□□ 0.93
MBD1-223ENST00000590215 ZNF410Q86VK4 478 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 KCNG4Q8TDN1 519 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 TMEM40Q8WWA1 233 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 PSPC1Q8WXF1 523 aaKnown RBP20.86■□□□□ 0.93
MBD1-223ENST00000590215 TMEM143Q96AN5 459 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 IFIH1Q9BYX4 1025 aaKnown RBP20.86■□□□□ 0.93
MBD1-223ENST00000590215 BHMT2Q9H2M3 363 aa20.86■□□□□ 0.93
MBD1-223ENST00000590215 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
MBD1-223ENST00000590215 ASAP2O43150 1006 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 EFCAB14O75071 495 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 ARL2P36404 184 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 IKBKEQ14164 716 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 PADI6Q6TGC4 694 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 USP49Q70CQ1 688 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 MCPH1Q8NEM0 835 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 PRPF31Q8WWY3 499 aaKnown RBP20.85■□□□□ 0.93
MBD1-223ENST00000590215 CALML4Q96GE6 196 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 EPSTI1Q96J88 318 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 OSMRQ99650 979 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 COL4A3BPQ9Y5P4 624 aa20.85■□□□□ 0.93
MBD1-223ENST00000590215 RBAK-RBAKDNI3L0D1 243 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 DARSP14868 501 aaKnown RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 MXD4Q14582 209 aaPredicted RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 SPECC1Q5M775 1068 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 AXDND1Q5T1B0 1012 aaPredicted RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 RHPN2Q8IUC4 686 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 SYMPKQ92797 1274 aaKnown RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 CDK5RAP3Q96JB5 506 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 PPP1R16BQ96T49 567 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 ERVK-5Q9HDB9 667 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 BMP2KQ9NSY1 1161 aaPredicted RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 CIZ1Q9ULV3 898 aaPredicted RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 PADI3Q9ULW8 664 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 GINS2Q9Y248 185 aa20.84■□□□□ 0.93
MBD1-223ENST00000590215 NOC2LQ9Y3T9 749 aaKnown RBP20.84■□□□□ 0.93
MBD1-223ENST00000590215 CUTAO60888 179 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 CD52P31358 61 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 KRT85P78386 507 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 POU5F1BQ06416 359 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 LAMTOR4Q0VGL1 99 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 KARSQ15046 597 aaKnown RBP20.83■□□□□ 0.93
MBD1-223ENST00000590215 ZRSR1Q15695 479 aaKnown RBP20.83■□□□□ 0.93
MBD1-223ENST00000590215 SYT2Q8N9I0 419 aaPredicted RBP20.83■□□□□ 0.93
MBD1-223ENST00000590215 LRRC15Q8TF66 581 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 IFT122Q9HBG6 1241 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 BLOC1S4Q9NUP1 217 aa20.83■□□□□ 0.93
MBD1-223ENST00000590215 LOXHD1Q8IVV2 1947 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 A0A087WZ62 844 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 RPS6KA5O75582 802 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 PLCG1P19174 1290 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 WDR5P61964 334 aaKnown RBP20.82■□□□□ 0.92
MBD1-223ENST00000590215 PAK2Q13177 524 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 ODR4Q5SWX8 454 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 C1orf186Q6ZWK4 172 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 FAM228AQ86W67 206 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 KSR1Q8IVT5 923 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 PHOSPHO2Q8TCD6 241 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 ASAP3Q8TDY4 903 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 NLRP7Q8WX94 980 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 PLIN2Q99541 437 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 FDXACB1Q9BRP7 624 aaPredicted RBP20.82■□□□□ 0.92
MBD1-223ENST00000590215 FTHL17Q9BXU8 183 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 GCOM2Q9BZD3 368 aaPredicted RBP20.82■□□□□ 0.92
MBD1-223ENST00000590215 SLC4A7Q9Y6M7 1214 aa20.82■□□□□ 0.92
MBD1-223ENST00000590215 LAMA2P24043 3122 aaKnown RBP20.82■□□□□ 0.92
MBD1-223ENST00000590215 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.81■□□□□ 0.92
MBD1-223ENST00000590215 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.81■□□□□ 0.92
MBD1-223ENST00000590215 GPR182O15218 404 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 PLA2G4BP0C869 781 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 GLRA2P23416 452 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 SLC12A3P55017 1021 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 RINT1Q6NUQ1 792 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 IFNLR1Q8IU57 520 aaPredicted RBP20.81■□□□□ 0.92
MBD1-223ENST00000590215 ZNF668Q96K58 619 aaPredicted RBP20.81■□□□□ 0.92
MBD1-223ENST00000590215 SLC9A7Q96T83 725 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 INO80BQ9C086 356 aaPredicted RBP20.81■□□□□ 0.92
MBD1-223ENST00000590215 POLR3FQ9H1D9 316 aaPredicted RBP20.81■□□□□ 0.92
MBD1-223ENST00000590215 TMX1Q9H3N1 280 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 KCND2Q9NZV8 630 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 CCDC39Q9UFE4 941 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 PCDHA7Q9UN72 937 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 ST3GAL5Q9UNP4 418 aa20.81■□□□□ 0.92
MBD1-223ENST00000590215 MICAL3Q7RTP6 2002 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.8■□□□□ 0.92
MBD1-223ENST00000590215 ZBBXA8MT70 800 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 GUCY2CP25092 1073 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 TXLNAP40222 546 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 SMAD3P84022 425 aaKnown RBP20.8■□□□□ 0.92
MBD1-223ENST00000590215 LEO1Q8WVC0 666 aaPredicted RBP20.8■□□□□ 0.92
MBD1-223ENST00000590215 CHAMP1Q96JM3 812 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 NLRP4Q96MN2 994 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 SCLT1Q96NL6 688 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 RUSC1Q9BVN2 902 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 TIPINQ9BVW5 301 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms