RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 CALR3Q96L12 384 aaKnown RBP11.61□□□□□ -0.55
ZNF540-208ENST00000589857 CCDC43Q96MW1 224 aaKnown RBP11.61□□□□□ -0.55
ZNF540-208ENST00000589857 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 IWS1Q96ST2 819 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 MXRA8Q9BRK3 442 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 ANKZF1Q9H8Y5 726 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 VIPAS39Q9H9C1 493 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 TBC1D22BQ9NU19 505 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 SRRDQ9UH36 339 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 FRMD4BQ9Y2L6 1034 aa11.61□□□□□ -0.55
ZNF540-208ENST00000589857 NPHP3-ACAD11A0A0J9YXS1 232 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 A0A0U1RQG5 324 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 BTBD19C9JJ37 291 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 DKC1O60832 514 aaKnown RBP eCLIP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ZBED4O75132 1171 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 P4HBP07237 508 aaKnown RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 FERP16591 822 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ZSCAN20P17040 1043 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ABCD1P33897 745 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 PSMC4P43686 418 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ZNF131P52739 623 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 FCGRTP55899 365 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 KCNMA1Q12791 1236 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 CETN1Q12798 172 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 RAPGEF1Q13905 1077 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 RRP1BQ14684 758 aaKnown RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ASTE1Q2TB18 679 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 GLE1Q53GS7 698 aaKnown RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 MIER3Q7Z3K6 550 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ANKRD23Q86SG2 305 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 GOLGA6L1Q8N7Z2 621 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 GJA10Q969M2 543 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 DYDC2Q96IM9 177 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 TEPSINQ96N21 525 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ZNF341Q9BYN7 854 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 TMEM39BQ9GZU3 492 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 RNF208Q9H0X6 261 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 GANQ9H2C0 597 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ZSWIM4Q9H7M6 989 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 TMEM206Q9H813 350 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 AS3MTQ9HBK9 375 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 DBR1Q9UK59 544 aaKnown RBP11.6□□□□□ -0.55
ZNF540-208ENST00000589857 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
ZNF540-208ENST00000589857 ZNF646O15015 1829 aaPredicted RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 A0A0U1RQJ8 604 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 GRID2IPA4D2P6 1211 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 IPO5O00410 1097 aaKnown RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 DLL1O00548 723 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 CES2O00748 559 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 IRF6O14896 467 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 SLITRK3O94933 977 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 LYPLA2O95372 231 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 PRKCIP41743 596 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 NAP1L1P55209 391 aaKnown RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 JAG1P78504 1218 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 CYP4A11Q02928 519 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 RAD51AP2Q09MP3 1159 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 SMC1AQ14683 1233 aaKnown RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 C1orf186Q6ZWK4 172 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 FAM178BQ8IXR5 827 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 FAM186BQ8IYM0 893 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 MMGT1Q8N4V1 131 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 GLIS3Q8NEA6 775 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 ATRIPQ8WXE1 791 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 TBC1D5Q92609 795 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 PARK7Q99497 189 aaKnown RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 WDR18Q9BV38 432 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 RUSC1Q9BVN2 902 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 FUT8Q9BYC5 575 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 MED4Q9NPJ6 270 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 LARSQ9P2J5 1176 aaKnown RBP11.59□□□□□ -0.55
ZNF540-208ENST00000589857 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
ZNF540-208ENST00000589857 EML1O00423 815 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 MAP2K7O14733 419 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 EPHB6O15197 1021 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 P4HA2O15460 535 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 CHMP2AO43633 222 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 EVI5O60447 810 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 NOL4O94818 638 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 PRPF6O94906 941 aaKnown RBP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 CLSTN1O94985 981 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 MYBP10242 640 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 KRT13P13646 458 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 SFNP31947 248 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 STAT1P42224 750 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 JAK3P52333 1124 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms