RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 POLGP54098 1239 aaPredicted RBP19.6■□□□□ 0.73
H3F3B-207ENST00000589417 FAM189BP81408 668 aa19.6■□□□□ 0.73
H3F3B-207ENST00000589417 DSC3Q14574 896 aa19.6■□□□□ 0.73
H3F3B-207ENST00000589417 IL17AQ16552 155 aa19.6■□□□□ 0.73
H3F3B-207ENST00000589417 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
H3F3B-207ENST00000589417 TCP11Q8WWU5 503 aa19.6■□□□□ 0.73
H3F3B-207ENST00000589417 LRWD1Q9UFC0 647 aa19.6■□□□□ 0.73
H3F3B-207ENST00000589417 MICAL3Q7RTP6 2002 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 COL4A6Q14031 1691 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 LCHNA4D1U4 455 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 ARHGEF15O94989 841 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 BMP15O95972 392 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 PDIA4P13667 645 aaKnown RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 POU5F1BQ06416 359 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 NFX1Q12986 1120 aaKnown RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 EMC2Q15006 297 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 DTHD1Q6ZMT9 781 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 KCTD17Q8N5Z5 321 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 ZNF689Q96CS4 500 aaPredicted RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 GCOM2Q9BZD3 368 aaPredicted RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 INO80BQ9C086 356 aaPredicted RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 RC3H2Q9HBD1 1191 aaKnown RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 XPNPEP1Q9NQW7 623 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 C1orf112Q9NSG2 853 aa19.59■□□□□ 0.73
H3F3B-207ENST00000589417 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
H3F3B-207ENST00000589417 EVPLQ92817 2033 aa19.58■□□□□ 0.73
H3F3B-207ENST00000589417 LINC01553A4QN01 128 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 MGEA5O60502 916 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 POU3F3P20264 500 aaPredicted RBP19.58■□□□□ 0.72
H3F3B-207ENST00000589417 ERVK-21P61565 698 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 SLC24A5Q71RS6 500 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 RHPN2Q8IUC4 686 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 NPAS4Q8IUM7 802 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 PIGOQ8TEQ8 1089 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 PRPF31Q8WWY3 499 aaKnown RBP19.58■□□□□ 0.72
H3F3B-207ENST00000589417 NLRP7Q8WX94 980 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 PSPC1Q8WXF1 523 aaKnown RBP19.58■□□□□ 0.72
H3F3B-207ENST00000589417 PPP1R16BQ96T49 567 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 IFT122Q9HBG6 1241 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 COL4A3BPQ9Y5P4 624 aa19.58■□□□□ 0.72
H3F3B-207ENST00000589417 PTPRSQ13332 1948 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 A0A087WZ62 844 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 C9IYK1 514 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 DGKIO75912 1065 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 STAG3L1P0CL83 205 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 ARL2P36404 184 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 SARSP49591 514 aaKnown RBP19.57■□□□□ 0.72
H3F3B-207ENST00000589417 MXD4Q14582 209 aaPredicted RBP19.57■□□□□ 0.72
H3F3B-207ENST00000589417 FERMT3Q86UX7 667 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 HSCBQ8IWL3 235 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 MYLIPQ8WY64 445 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 TMEM143Q96AN5 459 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 MTRQ99707 1265 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 ADAM2Q99965 735 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 FDXACB1Q9BRP7 624 aaPredicted RBP19.57■□□□□ 0.72
H3F3B-207ENST00000589417 TRAIPQ9BWF2 469 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 ELAC1Q9H777 363 aaKnown RBP19.57■□□□□ 0.72
H3F3B-207ENST00000589417 CHST12Q9NRB3 414 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 MTMR6Q9Y217 621 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 TTC3P53804 2025 aa19.57■□□□□ 0.72
H3F3B-207ENST00000589417 COL6A3P12111 3177 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 VPS37CA5D8V6 355 aaPredicted RBP19.56■□□□□ 0.72
H3F3B-207ENST00000589417 LAMTOR4Q0VGL1 99 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 RESTQ13127 1097 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 PCBP1Q15365 356 aaKnown RBP eCLIP19.56■□□□□ 0.72
H3F3B-207ENST00000589417 ECM1Q16610 540 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 HYIQ5T013 277 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 SRGAP1Q7Z6B7 1085 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 IFNLR1Q8IU57 520 aaPredicted RBP19.56■□□□□ 0.72
H3F3B-207ENST00000589417 SAMD11Q96NU1 681 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 TGS1Q96RS0 853 aaKnown RBP19.56■□□□□ 0.72
H3F3B-207ENST00000589417 YME1L1Q96TA2 773 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 PRDM12Q9H4Q4 367 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 ATP6V0A4Q9HBG4 840 aa19.56■□□□□ 0.72
H3F3B-207ENST00000589417 MORC2Q9Y6X9 1032 aaPredicted RBP19.56■□□□□ 0.72
H3F3B-207ENST00000589417 SLC26A4O43511 780 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 UPP2O95045 317 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 SFPQP23246 707 aaKnown RBP eCLIP19.55■□□□□ 0.72
H3F3B-207ENST00000589417 CCT6AP40227 531 aaKnown RBP19.55■□□□□ 0.72
H3F3B-207ENST00000589417 ADGRE1Q14246 886 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 KRT79Q5XKE5 535 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 POTEGQ6S5H5 508 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 KSR1Q8IVT5 923 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 MCPH1Q8NEM0 835 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 AK8Q96MA6 479 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 MMTAG2Q9BU76 263 aaKnown RBP19.55■□□□□ 0.72
H3F3B-207ENST00000589417 NFKBIZQ9BYH8 718 aa19.55■□□□□ 0.72
H3F3B-207ENST00000589417 ZSCAN16Q9H4T2 348 aaPredicted RBP19.55■□□□□ 0.72
H3F3B-207ENST00000589417 DENND3A2RUS2 1198 aa19.54■□□□□ 0.72
H3F3B-207ENST00000589417 STX6O43752 255 aa19.54■□□□□ 0.72
H3F3B-207ENST00000589417 LINC00271P0C7V0 271 aa19.54■□□□□ 0.72
H3F3B-207ENST00000589417 ZSCAN20P17040 1043 aaPredicted RBP19.54■□□□□ 0.72
H3F3B-207ENST00000589417 CYP11B2P19099 503 aa19.54■□□□□ 0.72
H3F3B-207ENST00000589417 SNX29Q8TEQ0 813 aa19.54■□□□□ 0.72
H3F3B-207ENST00000589417 ZNF668Q96K58 619 aaPredicted RBP19.54■□□□□ 0.72
H3F3B-207ENST00000589417 SCLT1Q96NL6 688 aa19.54■□□□□ 0.72
H3F3B-207ENST00000589417 GAS2L1Q99501 681 aaPredicted RBP19.54■□□□□ 0.72
H3F3B-207ENST00000589417 A0A087WWV3 80 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 A0A0U1RQF3 1178 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms