RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ST3GAL5Q9UNP4 418 aa11.05□□□□□ -0.64
PTPN2-208ENST00000589216 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
PTPN2-208ENST00000589216 SQORQ9Y6N5 450 aa11.05□□□□□ -0.64
PTPN2-208ENST00000589216 ADGRA3Q8IWK6 1321 aa11.05□□□□□ -0.64
PTPN2-208ENST00000589216 MYO7AQ13402 2215 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 PP2D1A8MPX8 630 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 DARSP14868 501 aaKnown RBP11.04□□□□□ -0.64
PTPN2-208ENST00000589216 TECP42680 631 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 TRAPPC10P48553 1259 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 NFX1Q12986 1120 aaKnown RBP11.04□□□□□ -0.64
PTPN2-208ENST00000589216 DSC3Q14574 896 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 EMC2Q15006 297 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 IL17AQ16552 155 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 PIGOQ8TEQ8 1089 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 TMEM143Q96AN5 459 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 CEP170P1Q96L14 293 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 YME1L1Q96TA2 773 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 ZSWIM4Q9H7M6 989 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 PRDM6Q9NQX0 595 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
PTPN2-208ENST00000589216 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
PTPN2-208ENST00000589216 INSL6Q9Y581 213 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
PTPN2-208ENST00000589216 A0A087WZ62 844 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 C9IYK1 514 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 LYPLA2O95372 231 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 TMOD1P28289 359 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-208ENST00000589216 ERVK-21P61565 698 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 PTGDRQ13258 359 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 GRB10Q13322 594 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 ORC2Q13416 577 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-208ENST00000589216 ECM1Q16610 540 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 XKR9Q5GH70 373 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 CATSPER3Q86XQ3 398 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 RHPN2Q8IUC4 686 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 IL27Q8NEV9 243 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 SCLT1Q96NL6 688 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-208ENST00000589216 ADAM2Q99965 735 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 FDXACB1Q9BRP7 624 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-208ENST00000589216 MINDY3Q9H8M7 445 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 SUCLA2Q9P2R7 463 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-208ENST00000589216 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 A0A0C4DFX4 3053 aa11.03□□□□□ -0.64
PTPN2-208ENST00000589216 H3BQV1 296 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 DKC1O60832 514 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 IGFBP4P22692 258 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 EIF4BP23588 611 aaKnown RBP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 RFC5P40937 340 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 RARRES1P49788 294 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 PAN2Q504Q3 1202 aaKnown RBP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 NPAS4Q8IUM7 802 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 SLC7A3Q8WY07 619 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 ZNF689Q96CS4 500 aaPredicted RBP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 TGS1Q96RS0 853 aaKnown RBP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 FTHL17Q9BXU8 183 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 RNF19AQ9NV58 838 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.02□□□□□ -0.65
PTPN2-208ENST00000589216 COL4A3BPQ9Y5P4 624 aa11.02□□□□□ -0.65
PTPN2-208ENST00000589216 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 GPR182O15218 404 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 USO1O60763 962 aaKnown RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 DGKIO75912 1065 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 FGFR1P11362 822 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 ATF7P17544 494 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 CDC25AP30304 524 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 SARSP49591 514 aaKnown RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 CCDC85BQ15834 202 aaPredicted RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 ASAP3Q8TDY4 903 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 PRPF31Q8WWY3 499 aaKnown RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 MTRQ99707 1265 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 TUFT1Q9NNX1 390 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 GPRC5CQ9NQ84 441 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 RGS18Q9NS28 235 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 MTCH2Q9Y6C9 303 aa11.01□□□□□ -0.65
PTPN2-208ENST00000589216 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
PTPN2-208ENST00000589216 SPTBN5Q9NRC6 3674 aaKnown RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 LAMTOR4Q0VGL1 99 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 CAPSQ13938 189 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 RILPL1Q5EBL4 403 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 FAM102BQ5T8I3 360 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 FAM173BQ6P4H8 233 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms