RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 MTMR9Q96QG7 549 aa17.03■□□□□ 0.32
ERCC1-209ENST00000589214 CEP89Q96ST8 783 aa17.03■□□□□ 0.32
ERCC1-209ENST00000589214 TTC12Q9H892 705 aaPredicted RBP17.03■□□□□ 0.32
ERCC1-209ENST00000589214 BMP2KQ9NSY1 1161 aaPredicted RBP17.03■□□□□ 0.32
ERCC1-209ENST00000589214 PCDHA12Q9UN75 941 aa17.03■□□□□ 0.32
ERCC1-209ENST00000589214 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
ERCC1-209ENST00000589214 GPM6BQ13491 265 aa17.02■□□□□ 0.32
ERCC1-209ENST00000589214 CTTNQ14247 550 aaKnown RBP17.02■□□□□ 0.32
ERCC1-209ENST00000589214 CEP170P1Q96L14 293 aa17.02■□□□□ 0.32
ERCC1-209ENST00000589214 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
ERCC1-209ENST00000589214 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.32
ERCC1-209ENST00000589214 C1orf112Q9NSG2 853 aa17.02■□□□□ 0.32
ERCC1-209ENST00000589214 NOL7Q9UMY1 257 aaKnown RBP17.02■□□□□ 0.32
ERCC1-209ENST00000589214 PCDHB6Q9Y5E3 794 aa17.02■□□□□ 0.32
ERCC1-209ENST00000589214 IGKV6-21A0A0C4DH24 114 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 MAFO75444 373 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 LINC00271P0C7V0 271 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 DARSP14868 501 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 FGFR4P22455 802 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 EIF4BP23588 611 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 DNM2P50570 870 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 POLGP54098 1239 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 C4orf19Q8IY42 314 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 CMTR2Q8IYT2 770 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 CRIPAKQ8N1N5 446 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 EIF2AK1Q9BQI3 630 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 LMCD1Q9NZU5 365 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 SUCLA2Q9P2R7 463 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 PCDHB7Q9Y5E2 793 aa17.01■□□□□ 0.31
ERCC1-209ENST00000589214 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
ERCC1-209ENST00000589214 POTEMA6NI47 508 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 C9IYK1 514 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 H3BNC9 293 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 TECP42680 631 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 DSC3Q14574 896 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 TJAP1Q5JTD0 557 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 RHPN2Q8IUC4 686 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 TPH2Q8IWU9 490 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 C4orf32Q8N8J7 132 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
ERCC1-209ENST00000589214 SLC7A3Q8WY07 619 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 SNX21Q969T3 373 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 NLRP4Q96MN2 994 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 JPH2Q9BR39 696 aaPredicted RBP17■□□□□ 0.31
ERCC1-209ENST00000589214 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 RWDD3Q9Y3V2 267 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 UNC80Q8N2C7 3258 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
ERCC1-209ENST00000589214 PRUNE2Q8WUY3 3088 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 A0A087WWV3 80 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 A0A087WZ62 844 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 VPS37CA5D8V6 355 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-209ENST00000589214 ZBTB39O15060 712 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
ERCC1-209ENST00000589214 CSPG5O95196 566 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 OR52Z1P0C646 297 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 BMPR1AP36894 532 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 TRAPPC10P48553 1259 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 TFF2Q03403 129 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 PTPROQ16827 1216 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 XKR9Q5GH70 373 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 KSR1Q8IVT5 923 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
ERCC1-209ENST00000589214 MRPL38Q96DV4 380 aaKnown RBP16.99■□□□□ 0.31
ERCC1-209ENST00000589214 FDXACB1Q9BRP7 624 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-209ENST00000589214 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-209ENST00000589214 FNDC1Q4ZHG4 1894 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-209ENST00000589214 TBKBP1A7MCY6 615 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 C5orf67F2Z3F1 127 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 SLITRK3O94933 977 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 FGFR1P11362 822 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 ZSCAN20P17040 1043 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 RFC5P40937 340 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 MRPS5P82675 430 aaKnown RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 PTGDRQ13258 359 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 EMC2Q15006 297 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 OTUD6AQ7L8S5 288 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 FERMT3Q86UX7 667 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 ZNF410Q86VK4 478 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 CLP1Q92989 425 aaKnown RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 TMEM143Q96AN5 459 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 ASB2Q96Q27 587 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 C11orf84Q9BUA3 381 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 DHX33Q9H6R0 707 aaKnown RBP16.98■□□□□ 0.31
ERCC1-209ENST00000589214 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 TMEM161AQ9NX61 479 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 PPME1Q9Y570 386 aa16.98■□□□□ 0.31
ERCC1-209ENST00000589214 SYT1P21579 422 aa16.97■□□□□ 0.31
ERCC1-209ENST00000589214 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERCC1-209ENST00000589214 ORC2Q13416 577 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-209ENST00000589214 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
ERCC1-209ENST00000589214 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms