RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 JPH2Q9BR39 696 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 POLR3FQ9H1D9 316 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 KBTBD4Q9NVX7 518 aa11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 SUCLA2Q9P2R7 463 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
SMARCA4-213ENST00000587988 SIP14410 1827 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 SFI1A8K8P3 1242 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 HIP1RO75146 1068 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 GPR32O75388 356 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 SLFN14P0C7P3 912 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 GLRA2P23416 452 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 TMOD1P28289 359 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 CASP1P29466 404 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 AFMP43652 599 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 DNM2P50570 870 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 CCL23P55773 120 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 MRPS6P82932 125 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 FAM160A1Q05DH4 1040 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 RBL2Q08999 1139 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 MGAT3Q09327 533 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 MAPK7Q13164 816 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 BFSP2Q13515 415 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 GIT2Q14161 759 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 IER5Q5VY09 327 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 NME8Q8N427 588 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 MCPH1Q8NEM0 835 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 TCP11Q8WWU5 503 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 PRPF31Q8WWY3 499 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 BSNDQ8WZ55 320 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 DDX12PQ92771 950 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 PAGE5Q96GU1 130 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 SCLYQ96I15 445 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 MAP7D2Q96T17 732 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 REEP2Q9BRK0 252 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 CUEDC2Q9H467 287 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
SMARCA4-213ENST00000587988 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 GAS2O43903 313 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 TIMP1P01033 207 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 IQCF3P0C7M6 154 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 SELPP16109 830 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 GPC3P51654 580 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 LAMTOR4Q0VGL1 99 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 CUL4BQ13620 913 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 MBTPS1Q14703 1052 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 GPNMBQ14956 572 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 KIZQ2M2Z5 673 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 FAM26DQ5JW98 314 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 KRBA2Q6ZNG9 492 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 RSPH3Q86UC2 560 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 CEP57L1Q8IYX8 460 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 PSPC1Q8WXF1 523 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 DNAJC19Q96DA6 116 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 CELF4Q9BZC1 486 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 ADAMTS10Q9H324 1103 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 KCND2Q9NZV8 630 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 GINS2Q9Y248 185 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 COL4A3BPQ9Y5P4 624 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 SCN5AQ14524 2016 aa11.87□□□□□ -0.51
SMARCA4-213ENST00000587988 A0A087WZ62 844 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 CAND2O75155 1236 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 SRGAP2CP0DJJ0 459 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 RAG1P15918 1043 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 MCM4P33991 863 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 CAPSQ13938 189 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 CNNM3Q8NE01 707 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 TMEM40Q8WWA1 233 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 VWCEQ96DN2 955 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 OSMRQ99650 979 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 FDXACB1Q9BRP7 624 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 DACT1Q9NYF0 836 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 TRPV2Q9Y5S1 764 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 MYH11P35749 1972 aa11.86□□□□□ -0.51
SMARCA4-213ENST00000587988 TANC1Q9C0D5 1861 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 GOLGA6L22H0YM25 854 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 M0QZ92 97 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 ASAP2O43150 1006 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms