RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FOXD4L3Q6VB84 417 aaPredicted RBP8.82□□□□□ -1
VMP1-204ENST00000587259 SRBD1Q8N5C6 995 aaKnown RBP8.82□□□□□ -1
VMP1-204ENST00000587259 ZNF713Q8N859 430 aaPredicted RBP8.82□□□□□ -1
VMP1-204ENST00000587259 CCDC148Q8NFR7 591 aa8.82□□□□□ -1
VMP1-204ENST00000587259 VN1R2Q8NFZ6 395 aa8.82□□□□□ -1
VMP1-204ENST00000587259 CYP2W1Q8TAV3 490 aa8.82□□□□□ -1
VMP1-204ENST00000587259 SPPL3Q8TCT6 385 aa8.82□□□□□ -1
VMP1-204ENST00000587259 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
VMP1-204ENST00000587259 GLG1Q92896 1179 aa8.82□□□□□ -1
VMP1-204ENST00000587259 GZF1Q9H116 711 aaPredicted RBP8.82□□□□□ -1
VMP1-204ENST00000587259 CDHR5Q9HBB8 845 aa8.82□□□□□ -1
VMP1-204ENST00000587259 SH3GLB2Q9NR46 395 aa8.82□□□□□ -1
VMP1-204ENST00000587259 FAM217BQ9NTX9 383 aaPredicted RBP8.82□□□□□ -1
VMP1-204ENST00000587259 PRKAG3Q9UGI9 489 aa8.82□□□□□ -1
VMP1-204ENST00000587259 CDH22Q9UJ99 828 aa8.82□□□□□ -1
VMP1-204ENST00000587259 RALGAPA2Q2PPJ7 1873 aa8.82□□□□□ -1
VMP1-204ENST00000587259 KIAA1671Q9BY89 1806 aa8.82□□□□□ -1
VMP1-204ENST00000587259 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
VMP1-204ENST00000587259 MBLAC1A4D2B0 266 aaPredicted RBP8.81□□□□□ -1
VMP1-204ENST00000587259 MGEA5O60502 916 aa8.81□□□□□ -1
VMP1-204ENST00000587259 INSRRP14616 1297 aa8.81□□□□□ -1
VMP1-204ENST00000587259 NASPP49321 788 aaPredicted RBP8.81□□□□□ -1
VMP1-204ENST00000587259 MRPS6P82932 125 aaKnown RBP8.81□□□□□ -1
VMP1-204ENST00000587259 STK38Q15208 465 aa8.81□□□□□ -1
VMP1-204ENST00000587259 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
VMP1-204ENST00000587259 HERC4Q5GLZ8 1057 aaPredicted RBP8.81□□□□□ -1
VMP1-204ENST00000587259 LRSAM1Q6UWE0 723 aa8.81□□□□□ -1
VMP1-204ENST00000587259 CCDC73Q6ZRK6 1079 aa8.81□□□□□ -1
VMP1-204ENST00000587259 TSHZ1Q6ZSZ6 1077 aa8.81□□□□□ -1
VMP1-204ENST00000587259 BICD2Q8TD16 824 aa8.81□□□□□ -1
VMP1-204ENST00000587259 POF1BQ8WVV4 589 aa8.81□□□□□ -1
VMP1-204ENST00000587259 SEPT1Q8WYJ6 367 aa8.81□□□□□ -1
VMP1-204ENST00000587259 PHKBQ93100 1093 aa8.81□□□□□ -1
VMP1-204ENST00000587259 MSLNLQ96KJ4 702 aa8.81□□□□□ -1
VMP1-204ENST00000587259 RPGRIP1Q96KN7 1286 aa8.81□□□□□ -1
VMP1-204ENST00000587259 TMX1Q9H3N1 280 aa8.81□□□□□ -1
VMP1-204ENST00000587259 GDPD2Q9HCC8 539 aa8.81□□□□□ -1
VMP1-204ENST00000587259 RCOR1Q9UKL0 485 aa8.81□□□□□ -1
VMP1-204ENST00000587259 NOL7Q9UMY1 257 aaKnown RBP8.81□□□□□ -1
VMP1-204ENST00000587259 FAM50BQ9Y247 325 aa8.81□□□□□ -1
VMP1-204ENST00000587259 GINS2Q9Y248 185 aa8.81□□□□□ -1
VMP1-204ENST00000587259 USP15Q9Y4E8 981 aaPredicted RBP8.81□□□□□ -1
VMP1-204ENST00000587259 MORC2Q9Y6X9 1032 aaPredicted RBP8.81□□□□□ -1
VMP1-204ENST00000587259 TTC3P53804 2025 aa8.8□□□□□ -1
VMP1-204ENST00000587259 A0A1W2PQ27 194 aa8.8□□□□□ -1
VMP1-204ENST00000587259 A0A1W2PQ64 194 aa8.8□□□□□ -1
VMP1-204ENST00000587259 A0A1W2PQD8 194 aa8.8□□□□□ -1
VMP1-204ENST00000587259 TMEM221A6NGB7 291 aa8.8□□□□□ -1
VMP1-204ENST00000587259 M0R296 226 aa8.8□□□□□ -1
VMP1-204ENST00000587259 PPP6R2O75170 966 aa8.8□□□□□ -1
VMP1-204ENST00000587259 CAVIN2O95810 425 aa8.8□□□□□ -1
VMP1-204ENST00000587259 PDGFBP01127 241 aaPredicted RBP8.8□□□□□ -1
VMP1-204ENST00000587259 RB1P06400 928 aa8.8□□□□□ -1
VMP1-204ENST00000587259 KRT2P35908 639 aa8.8□□□□□ -1
VMP1-204ENST00000587259 VCPP55072 806 aaKnown RBP8.8□□□□□ -1
VMP1-204ENST00000587259 MTMR1Q13613 665 aa8.8□□□□□ -1
VMP1-204ENST00000587259 PLCB4Q15147 1175 aa8.8□□□□□ -1
VMP1-204ENST00000587259 PFKFB3Q16875 520 aaPredicted RBP8.8□□□□□ -1
VMP1-204ENST00000587259 FAM102BQ5T8I3 360 aa8.8□□□□□ -1
VMP1-204ENST00000587259 TAF2Q6P1X5 1199 aa8.8□□□□□ -1
VMP1-204ENST00000587259 TRMT1LQ7Z2T5 733 aaKnown RBP8.8□□□□□ -1
VMP1-204ENST00000587259 NLRX1Q86UT6 975 aa8.8□□□□□ -1
VMP1-204ENST00000587259 NOSTRINQ8IVI9 506 aa8.8□□□□□ -1
VMP1-204ENST00000587259 CRIPAKQ8N1N5 446 aa8.8□□□□□ -1
VMP1-204ENST00000587259 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
VMP1-204ENST00000587259 TMEM40Q8WWA1 233 aa8.8□□□□□ -1
VMP1-204ENST00000587259 EDAQ92838 391 aa8.8□□□□□ -1
VMP1-204ENST00000587259 CUL5Q93034 780 aa8.8□□□□□ -1
VMP1-204ENST00000587259 PBXIP1Q96AQ6 731 aa8.8□□□□□ -1
VMP1-204ENST00000587259 RRP36Q96EU6 259 aaKnown RBP8.8□□□□□ -1
VMP1-204ENST00000587259 CCDC34Q96HJ3 373 aa8.8□□□□□ -1
VMP1-204ENST00000587259 SENP7Q9BQF6 1050 aa8.8□□□□□ -1
VMP1-204ENST00000587259 SPZ1Q9BXG8 430 aa8.8□□□□□ -1
VMP1-204ENST00000587259 LMAN2LQ9H0V9 348 aa8.8□□□□□ -1
VMP1-204ENST00000587259 ERAP1Q9NZ08 941 aa8.8□□□□□ -1
VMP1-204ENST00000587259 SEC63Q9UGP8 760 aaKnown RBP8.8□□□□□ -1
VMP1-204ENST00000587259 PADI3Q9ULW8 664 aa8.8□□□□□ -1
VMP1-204ENST00000587259 UBIAD1Q9Y5Z9 338 aa8.8□□□□□ -1
VMP1-204ENST00000587259 PLXNA4Q9HCM2 1894 aa8.79□□□□□ -1
VMP1-204ENST00000587259 DDX39AO00148 427 aaKnown RBP8.79□□□□□ -1
VMP1-204ENST00000587259 STAM2O75886 525 aa8.79□□□□□ -1
VMP1-204ENST00000587259 ARP10275 920 aa8.79□□□□□ -1
VMP1-204ENST00000587259 FGFR1P11362 822 aa8.79□□□□□ -1
VMP1-204ENST00000587259 SCG2P13521 617 aa8.79□□□□□ -1
VMP1-204ENST00000587259 PBX3P40426 434 aa8.79□□□□□ -1
VMP1-204ENST00000587259 ME1P48163 572 aa8.79□□□□□ -1
VMP1-204ENST00000587259 TRAPPC10P48553 1259 aa8.79□□□□□ -1
VMP1-204ENST00000587259 ERVFC1P60507 584 aa8.79□□□□□ -1
VMP1-204ENST00000587259 ZXDAP98168 799 aa8.79□□□□□ -1
VMP1-204ENST00000587259 GUCY1B3Q02153 619 aa8.79□□□□□ -1
VMP1-204ENST00000587259 TCF15Q12870 199 aa8.79□□□□□ -1
VMP1-204ENST00000587259 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
VMP1-204ENST00000587259 PAK2Q13177 524 aa8.79□□□□□ -1
VMP1-204ENST00000587259 ADALQ6DHV7 355 aa8.79□□□□□ -1
VMP1-204ENST00000587259 LLGL2Q6P1M3 1020 aa8.79□□□□□ -1
VMP1-204ENST00000587259 TRIM67Q6ZTA4 783 aa8.79□□□□□ -1
VMP1-204ENST00000587259 RSPH3Q86UC2 560 aa8.79□□□□□ -1
VMP1-204ENST00000587259 NPAS4Q8IUM7 802 aa8.79□□□□□ -1
VMP1-204ENST00000587259 DIS3L2Q8IYB7 885 aaKnown RBP8.79□□□□□ -1
VMP1-204ENST00000587259 CMTR2Q8IYT2 770 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms