RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TRAF3IP3Q9Y228 551 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 MYH11P35749 1972 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 EIF3DO15371 548 aaKnown RBP eCLIP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 ATG7O95352 703 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 GCNT3O95395 438 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 NMT1P30419 496 aaKnown RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 GRK4P32298 578 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 MTIF2P46199 727 aaKnown RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 CTCFP49711 727 aaPredicted RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 UBXN1Q04323 297 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 NOLC1Q14978 699 aaKnown RBP eCLIP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 UTP14CQ5TAP6 766 aaKnown RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 ATP6V0A1Q93050 837 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 CEP63Q96MT8 703 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 IGSF9BQ9UPX0 1349 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 A0A1W2PQC6 194 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 SUPT20HL2P0C7V6 817 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 PRKCSHP14314 528 aaPredicted RBP22.52■■□□□ 1.2
ATG4D-204ENST00000586417 MAP3K21Q5TCX8 1036 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 PLA2G4FQ68DD2 849 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 SWSAP1Q6NVH7 229 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 SLAIN1Q8ND83 568 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 SH3TC2Q8TF17 1288 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 SH2D3AQ9BRG2 576 aa22.52■■□□□ 1.2
ATG4D-204ENST00000586417 GNEQ9Y223 722 aaKnown RBP22.52■■□□□ 1.2
ATG4D-204ENST00000586417 ARID2Q68CP9 1835 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 USO1O60763 962 aaKnown RBP22.51■■□□□ 1.19
ATG4D-204ENST00000586417 INHAP05111 366 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 CNGA1P29973 690 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 DNM2P50570 870 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 NPEPPSP55786 919 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 IRX5P78411 483 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-204ENST00000586417 KCNA1Q09470 495 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 ODR4Q5SWX8 454 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 MIS18BP1Q6P0N0 1132 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 ZNF720Q7Z2F6 126 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 TMEM139Q8IV31 216 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 SPATA33Q96N06 139 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 FAM184BQ9ULE4 1060 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 ZMYM2Q9UBW7 1377 aa22.51■■□□□ 1.19
ATG4D-204ENST00000586417 GSTTP1A0A1W2PQM5 241 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 PDXKO00764 312 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 DKC1O60832 514 aaKnown RBP eCLIP22.5■■□□□ 1.19
ATG4D-204ENST00000586417 GH1P01241 217 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 GYPCP04921 128 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 ADKP55263 362 aaKnown RBP22.5■■□□□ 1.19
ATG4D-204ENST00000586417 RBL2Q08999 1139 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 FAM178BQ8IXR5 827 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 NOC4LQ9BVI4 516 aaKnown RBP22.5■■□□□ 1.19
ATG4D-204ENST00000586417 TIPINQ9BVW5 301 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 STRA6Q9BX79 667 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 DNAH12Q6ZR08 3092 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 UBE4BO95155 1302 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 PPP1R37O75864 691 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 AKR1A1P14550 325 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 ZC2HC1CQ53FD0 456 aaPredicted RBP22.5■■□□□ 1.19
ATG4D-204ENST00000586417 XKR9Q5GH70 373 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 CCDC112Q8NEF3 446 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 GPR20Q99678 358 aa22.5■■□□□ 1.19
ATG4D-204ENST00000586417 TYW1Q9NV66 732 aaKnown RBP22.5■■□□□ 1.19
ATG4D-204ENST00000586417 IGKV6D-21A0A0A0MT36 114 aa22.49■■□□□ 1.19
ATG4D-204ENST00000586417 AKR1B15C9JRZ8 316 aaPredicted RBP22.49■■□□□ 1.19
ATG4D-204ENST00000586417 DYNC1LI2O43237 492 aaPredicted RBP22.49■■□□□ 1.19
ATG4D-204ENST00000586417 MARSP56192 900 aaKnown RBP22.49■■□□□ 1.19
ATG4D-204ENST00000586417 PRKCEQ02156 737 aa22.49■■□□□ 1.19
ATG4D-204ENST00000586417 MAN2A1Q16706 1144 aa22.49■■□□□ 1.19
ATG4D-204ENST00000586417 MAEAQ7L5Y9 396 aa22.49■■□□□ 1.19
ATG4D-204ENST00000586417 AFG1LQ8WV93 481 aa22.49■■□□□ 1.19
ATG4D-204ENST00000586417 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
ATG4D-204ENST00000586417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.49■■□□□ 1.19
ATG4D-204ENST00000586417 TGFB1I1O43294 461 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 TPM2P07951 284 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 LAMC2Q13753 1193 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 VWA3BQ502W6 1294 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 OTUD6AQ7L8S5 288 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 TRMT1LQ7Z2T5 733 aaKnown RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 PPFIBP1Q86W92 1011 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 OR6J1Q8NGC5 347 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 EMID1Q96A84 441 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 MAFBQ9Y5Q3 323 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 MYH9P35579 1960 aaKnown RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 PES1O00541 588 aaKnown RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 SEPT4O43236 478 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 MFAP3LO75121 409 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 MAPTP10636 758 aaKnown RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 CASP14P31944 242 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 TCF7P36402 384 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 KCNJ6P48051 423 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 FXR1P51114 621 aaKnown RBP eCLIP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 ADAM9Q13443 819 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 CTU1Q7Z7A3 348 aaKnown RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 TLK2Q86UE8 772 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 PCYT2Q99447 389 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 NDST4Q9H3R1 872 aa22.48■■□□□ 1.19
ATG4D-204ENST00000586417 LARSQ9P2J5 1176 aaKnown RBP22.48■■□□□ 1.19
ATG4D-204ENST00000586417 NOP56O00567 594 aaKnown RBP22.47■■□□□ 1.19
ATG4D-204ENST00000586417 CALUO43852 315 aaPredicted RBP22.47■■□□□ 1.19
ATG4D-204ENST00000586417 GNA14O95837 355 aa22.47■■□□□ 1.19
ATG4D-204ENST00000586417 PLS3P13797 630 aa22.47■■□□□ 1.19
ATG4D-204ENST00000586417 ATP4AP20648 1035 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms