RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CLP1Q92989 425 aaKnown RBP20.97■□□□□ 0.95
ATG4D-203ENST00000585752 INTS4Q96HW7 963 aaKnown RBP20.97■□□□□ 0.95
ATG4D-203ENST00000585752 MBOAT7Q96N66 472 aa20.97■□□□□ 0.95
ATG4D-203ENST00000585752 FOXP1Q9H334 677 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-203ENST00000585752 ATP6V0A4Q9HBG4 840 aa20.97■□□□□ 0.95
ATG4D-203ENST00000585752 FOXD4L1Q9NU39 408 aa20.97■□□□□ 0.95
ATG4D-203ENST00000585752 TBKBP1A7MCY6 615 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 TBX3O15119 743 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 NCK2O43639 380 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 CSPG5O95196 566 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 KCNA5P22460 613 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 NAALADL2Q58DX5 795 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 FAM228AQ86W67 206 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 EXOC8Q8IYI6 725 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 SLFN12Q8IYM2 578 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 TMEM40Q8WWA1 233 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 NIFKQ9BYG3 293 aaKnown RBP20.96■□□□□ 0.95
ATG4D-203ENST00000585752 GCOM2Q9BZD3 368 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-203ENST00000585752 RC3H2Q9HBD1 1191 aaKnown RBP20.96■□□□□ 0.95
ATG4D-203ENST00000585752 NOL7Q9UMY1 257 aaKnown RBP20.96■□□□□ 0.95
ATG4D-203ENST00000585752 PCDHB12Q9Y5F1 795 aa20.96■□□□□ 0.95
ATG4D-203ENST00000585752 MRPL42Q9Y6G3 142 aaKnown RBP20.96■□□□□ 0.95
ATG4D-203ENST00000585752 HOXA2O43364 376 aa20.95■□□□□ 0.94
ATG4D-203ENST00000585752 SLC37A4O43826 429 aa20.95■□□□□ 0.94
ATG4D-203ENST00000585752 EIF4BP23588 611 aaKnown RBP20.95■□□□□ 0.94
ATG4D-203ENST00000585752 TCEAL5Q5H9L2 206 aa20.95■□□□□ 0.94
ATG4D-203ENST00000585752 ABI1Q8IZP0 508 aa20.95■□□□□ 0.94
ATG4D-203ENST00000585752 P2RX5Q93086 422 aa20.95■□□□□ 0.94
ATG4D-203ENST00000585752 ZNF668Q96K58 619 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-203ENST00000585752 INO80BQ9C086 356 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-203ENST00000585752 MGEA5O60502 916 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 ATP2B1P20020 1258 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 QARSP47897 775 aaKnown RBP20.94■□□□□ 0.94
ATG4D-203ENST00000585752 PPP2R5CQ13362 524 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 PUS10Q3MIT2 529 aaKnown RBP20.94■□□□□ 0.94
ATG4D-203ENST00000585752 NCAPH2Q6IBW4 605 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 NOSTRINQ8IVI9 506 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 TNFRSF25Q93038 417 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 ELAC1Q9H777 363 aaKnown RBP20.94■□□□□ 0.94
ATG4D-203ENST00000585752 ALG13Q9NP73 1137 aaKnown RBP20.94■□□□□ 0.94
ATG4D-203ENST00000585752 TMEM161AQ9NX61 479 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 FAM50BQ9Y247 325 aa20.94■□□□□ 0.94
ATG4D-203ENST00000585752 CUL9Q8IWT3 2517 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-203ENST00000585752 VPS37CA5D8V6 355 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-203ENST00000585752 GRM6O15303 877 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 P4HBP07237 508 aaKnown RBP20.93■□□□□ 0.94
ATG4D-203ENST00000585752 GPC3P51654 580 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 BECN1Q14457 450 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 OTUD6AQ7L8S5 288 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 SLC7A3Q8WY07 619 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 ADAMTS10Q9H324 1103 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 CLDND1Q9NY35 253 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 DACT1Q9NYF0 836 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 SUCLA2Q9P2R7 463 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-203ENST00000585752 PLAGL2Q9UPG8 496 aa20.93■□□□□ 0.94
ATG4D-203ENST00000585752 FAM205CA6NFA0 338 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 C9IYK1 514 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 GATMP50440 423 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 LEXMQ3ZCV2 418 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 EARS2Q5JPH6 523 aaKnown RBP20.92■□□□□ 0.94
ATG4D-203ENST00000585752 B3GNT9Q6UX72 402 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 RHPN2Q8IUC4 686 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 LINC01465Q8N7H1 131 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 RNF169Q8NCN4 708 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 MICAL1Q8TDZ2 1067 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 CEP170P1Q96L14 293 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 CCDC43Q96MW1 224 aaKnown RBP20.92■□□□□ 0.94
ATG4D-203ENST00000585752 NECAB3Q96P71 396 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-203ENST00000585752 SH2D3AQ9BRG2 576 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 IGFLR1Q9H665 355 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 KCNMB3Q9NPA1 279 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 ATG2AQ2TAZ0 1938 aa20.92■□□□□ 0.94
ATG4D-203ENST00000585752 EML1O00423 815 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 DARSP14868 501 aaKnown RBP20.91■□□□□ 0.94
ATG4D-203ENST00000585752 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
ATG4D-203ENST00000585752 POLGP54098 1239 aaPredicted RBP20.91■□□□□ 0.94
ATG4D-203ENST00000585752 EPHA7Q15375 998 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 TARBP2Q15633 366 aaKnown RBP20.91■□□□□ 0.94
ATG4D-203ENST00000585752 CSPP1Q1MSJ5 1256 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 FAM102BQ5T8I3 360 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 POTEDQ86YR6 584 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 THNSL1Q8IYQ7 743 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 CRIPAKQ8N1N5 446 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 KLHL23Q8NBE8 558 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 PABPC5Q96DU9 382 aaKnown RBP20.91■□□□□ 0.94
ATG4D-203ENST00000585752 PLXNA4Q9HCM2 1894 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 PPME1Q9Y570 386 aa20.91■□□□□ 0.94
ATG4D-203ENST00000585752 TMEM150BA6NC51 233 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 MAFO75444 373 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-203ENST00000585752 CALCRLQ16602 461 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 PLA2G4FQ68DD2 849 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 PTCRAQ6ISU1 281 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-203ENST00000585752 ZNF410Q86VK4 478 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 POF1BQ8WVV4 589 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 CYP26B1Q9NR63 512 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 VAV3Q9UKW4 847 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 PCDHA12Q9UN75 941 aa20.9■□□□□ 0.94
ATG4D-203ENST00000585752 A0A087WZ62 844 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 NEMFO60524 1076 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms