RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
LIG3-204ENST00000585740 SPATA31C2B4DYI2 1134 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 ZBTB39O15060 712 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 EPHB6O15197 1021 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 CLIC2O15247 247 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 MAPK13O15264 365 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 FANCGO15287 622 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 ATP9AO75110 1047 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 TADA3O75528 432 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 NOL4O94818 638 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 KCNA2P16389 499 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 ICAM3P32942 547 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.44
LIG3-204ENST00000585740 STXBP2Q15833 593 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 ASIC2Q16515 512 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 WHAMMP3Q1A5X7 153 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 DCAF17Q5H9S7 520 aaPredicted RBP12.33□□□□□ -0.44
LIG3-204ENST00000585740 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 DAW1Q8N136 415 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 KIFAP3Q92845 792 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 BORCS6Q96GS4 357 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 MPHOSPH6Q99547 160 aaKnown RBP12.33□□□□□ -0.44
LIG3-204ENST00000585740 MCOLN1Q9GZU1 580 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 AIPL1Q9NZN9 384 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 ARHGAP20Q9P2F6 1191 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 GUCA1BQ9UMX6 200 aa12.33□□□□□ -0.44
LIG3-204ENST00000585740 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 ANO9A1A5B4 782 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 H0YCG3 227 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 IRF6O14896 467 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 PJA2O43164 708 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 N4BP1O75113 896 aaKnown RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 TACC1O75410 805 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 EIF3JO75822 258 aaKnown RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 SLC25A27O95847 323 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 CCNE2O96020 404 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 KRT13P13646 458 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 SCP2P22307 547 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 MAGEA1P43355 309 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 SMTNP53814 917 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 NCKAP1LP55160 1127 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 RTP1P59025 263 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 IRX3P78415 501 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 GTF2BQ00403 316 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 PRKG1Q13976 671 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 ZC2HC1CQ53FD0 456 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
LIG3-204ENST00000585740 PRRT2Q7Z6L0 340 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 SECISBP2LQ93073 1101 aaKnown RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 NLRC4Q9NPP4 1024 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 ARGLU1Q9NWB6 273 aaPredicted RBP12.32□□□□□ -0.44
LIG3-204ENST00000585740 SLC9A2Q9UBY0 812 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 FZD1Q9UP38 647 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 PCDHA13Q9Y5I0 950 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 ATP8B3O60423 1300 aa12.32□□□□□ -0.44
LIG3-204ENST00000585740 DOCK5Q9H7D0 1870 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 BACH1O14867 736 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 P4HA2O15460 535 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 EXOC3O60645 756 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 AOC2O75106 756 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 RFX1P22670 979 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 PON1P27169 355 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 CASP4P49662 377 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 KCNA1Q09470 495 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 PPIL2Q13356 520 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 RAPGEF1Q13905 1077 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 ELF2Q15723 593 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 UGCGQ16739 394 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 ASTE1Q2TB18 679 aaPredicted RBP12.31□□□□□ -0.44
LIG3-204ENST00000585740 TDRD12Q587J7 1177 aaKnown RBP12.31□□□□□ -0.44
LIG3-204ENST00000585740 KLHDC7AQ5VTJ3 777 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
LIG3-204ENST00000585740 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 RNF10Q8N5U6 811 aaKnown RBP12.31□□□□□ -0.44
LIG3-204ENST00000585740 CCDC155Q8N6L0 562 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 TRIM58Q8NG06 486 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 SPIRE2Q8WWL2 714 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms