RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 FDXACB1Q9BRP7 624 aaPredicted RBP11.93□□□□□ -0.5
SAFB2-202ENST00000585449 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
SAFB2-202ENST00000585449 RC3H2Q9HBD1 1191 aaKnown RBP11.93□□□□□ -0.5
SAFB2-202ENST00000585449 PCDHB7Q9Y5E2 793 aa11.93□□□□□ -0.5
SAFB2-202ENST00000585449 CHD9Q3L8U1 2897 aa11.93□□□□□ -0.5
SAFB2-202ENST00000585449 TTC3P53804 2025 aa11.93□□□□□ -0.5
SAFB2-202ENST00000585449 C9IYK1 514 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 LINC00271P0C7V0 271 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 STAG3L1P0CL83 205 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 U2AF2P26368 475 aaKnown RBP eCLIP11.92□□□□□ -0.5
SAFB2-202ENST00000585449 SARSP49591 514 aaKnown RBP11.92□□□□□ -0.5
SAFB2-202ENST00000585449 MCM2P49736 904 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 TOB1P50616 345 aaPredicted RBP11.92□□□□□ -0.5
SAFB2-202ENST00000585449 FAM189BP81408 668 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 GPM6BQ13491 265 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
SAFB2-202ENST00000585449 FAM102BQ5T8I3 360 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 SLC24A5Q71RS6 500 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 OTUD6AQ7L8S5 288 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 C4orf32Q8N8J7 132 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 DHX33Q9H6R0 707 aaKnown RBP11.92□□□□□ -0.5
SAFB2-202ENST00000585449 LRFN2Q9ULH4 789 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
SAFB2-202ENST00000585449 ADGRA3Q8IWK6 1321 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 H3BNC9 293 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 DLL1O00548 723 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 SPATA31C1P0DKV0 1188 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 BMPR1AP36894 532 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 POLGP54098 1239 aaPredicted RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 MCTP1Q6DN14 999 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 PIGOQ8TEQ8 1089 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 SLC7A3Q8WY07 619 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 NLRP4Q96MN2 994 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 SAMD11Q96NU1 681 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 GCOM2Q9BZD3 368 aaPredicted RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 C1orf112Q9NSG2 853 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 NOL7Q9UMY1 257 aaKnown RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
SAFB2-202ENST00000585449 MRPL42Q9Y6G3 142 aaKnown RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 PRRC2BQ5JSZ5 2229 aaKnown RBP11.91□□□□□ -0.5
SAFB2-202ENST00000585449 MED24O75448 989 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 LYPLA2O95372 231 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 SRGAP2CP0DJJ0 459 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 FGFR1P11362 822 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 CTNNB1P35222 781 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 RFC5P40937 340 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 CDC42EP1Q00587 391 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 CMTR2Q8IYT2 770 aaKnown RBP11.9□□□□□ -0.5
SAFB2-202ENST00000585449 CLP1Q92989 425 aaKnown RBP11.9□□□□□ -0.5
SAFB2-202ENST00000585449 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
SAFB2-202ENST00000585449 ATP6V0A4Q9HBG4 840 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 IFT122Q9HBG6 1241 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 XPNPEP1Q9NQW7 623 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 ANKEF1Q9NU02 776 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 LMCD1Q9NZU5 365 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 COL4A3BPQ9Y5P4 624 aa11.9□□□□□ -0.5
SAFB2-202ENST00000585449 CHD7Q9P2D1 2997 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 TBKBP1A7MCY6 615 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 H3BQV1 296 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 GRM6O15303 877 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 RARRES1P49788 294 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 TFF2Q03403 129 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 LAMTOR4Q0VGL1 99 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 PTGDRQ13258 359 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
SAFB2-202ENST00000585449 EMC2Q15006 297 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 ZNF410Q86VK4 478 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 EXOC8Q8IYI6 725 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 PSPC1Q8WXF1 523 aaKnown RBP11.89□□□□□ -0.51
SAFB2-202ENST00000585449 MTRQ99707 1265 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
SAFB2-202ENST00000585449 ALG13Q9NP73 1137 aaKnown RBP11.89□□□□□ -0.51
SAFB2-202ENST00000585449 TMEM161AQ9NX61 479 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 PPME1Q9Y570 386 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 COL4A6Q14031 1691 aa11.89□□□□□ -0.51
SAFB2-202ENST00000585449 C5orf67F2Z3F1 127 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 CSPG5O95196 566 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 RB1P06400 928 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 XRCC6P12956 609 aaKnown RBP eCLIP11.88□□□□□ -0.51
SAFB2-202ENST00000585449 IL17AQ16552 155 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 ECM1Q16610 540 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 LONRF3Q496Y0 759 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
SAFB2-202ENST00000585449 FAM43BQ6ZT52 329 aaPredicted RBP11.88□□□□□ -0.51
SAFB2-202ENST00000585449 MAEAQ7L5Y9 396 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 CATSPER4Q7RTX7 472 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
SAFB2-202ENST00000585449 ECHDC2Q86YB7 292 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms