RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 FBXO47Q5MNV8 452 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 KRT79Q5XKE5 535 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.79■■□□□ 1.72
LSM7-202ENST00000585395 TPH2Q8IWU9 490 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 EXOC8Q8IYI6 725 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 DYDC2Q96IM9 177 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 CCDC43Q96MW1 224 aaKnown RBP25.79■■□□□ 1.72
LSM7-202ENST00000585395 CELF4Q9BZC1 486 aaKnown RBP25.79■■□□□ 1.72
LSM7-202ENST00000585395 CFAP45Q9UL16 551 aa25.79■■□□□ 1.72
LSM7-202ENST00000585395 UPP2O95045 317 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 IGSF22Q8N9C0 903 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 AK8Q96MA6 479 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 PPP1R16BQ96T49 567 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 JPH2Q9BR39 696 aaPredicted RBP25.78■■□□□ 1.72
LSM7-202ENST00000585395 POLR3CQ9BUI4 534 aaPredicted RBP25.78■■□□□ 1.72
LSM7-202ENST00000585395 OSBPL7Q9BZF2 842 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 LMCD1Q9NZU5 365 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 AKT3Q9Y243 479 aa25.78■■□□□ 1.72
LSM7-202ENST00000585395 VWA3AA6NCI4 1184 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 DDX11L8A8MPP1 907 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 RBAK-RBAKDNI3L0D1 243 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 ZNF862O60290 1169 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 LYPLA2O95372 231 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 GJB5O95377 273 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 C22orf31O95567 290 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 CYP4A11Q02928 519 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 TBC1D8BQ0IIM8 1120 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 PAK2Q13177 524 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 STK38Q15208 465 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 MTERF2Q49AM1 385 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 FAM173BQ6P4H8 233 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 ALYREFQ86V81 257 aaKnown RBP25.77■■□□□ 1.72
LSM7-202ENST00000585395 SCLT1Q96NL6 688 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 RAD9AQ99638 391 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 HSD17B14Q9BPX1 270 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 NIFKQ9BYG3 293 aaKnown RBP25.77■■□□□ 1.72
LSM7-202ENST00000585395 MORC2Q9Y6X9 1032 aaPredicted RBP25.77■■□□□ 1.72
LSM7-202ENST00000585395 BRWD1Q9NSI6 2320 aa25.77■■□□□ 1.72
LSM7-202ENST00000585395 PRR33A8MZF0 331 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 ZBTB42B2RXF5 422 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 SLC26A4O43511 780 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 LPXNO60711 386 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 SLITRK3O94933 977 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 ARHGEF15O94989 841 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 RPA1P27694 616 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 CD52P31358 61 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 CTTNQ14247 550 aaKnown RBP25.76■■□□□ 1.71
LSM7-202ENST00000585395 EFCAB12Q6NXP0 572 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 USP28Q96RU2 1077 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 SUGCTQ9HAC7 445 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 RGL1Q9NZL6 768 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 CLIC4Q9Y696 253 aa25.76■■□□□ 1.71
LSM7-202ENST00000585395 KDM3AQ9Y4C1 1321 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 XRCC6P12956 609 aaKnown RBP eCLIP25.75■■□□□ 1.71
LSM7-202ENST00000585395 YWHABP31946 246 aaKnown RBP25.75■■□□□ 1.71
LSM7-202ENST00000585395 LONP1P36776 959 aaKnown RBP25.75■■□□□ 1.71
LSM7-202ENST00000585395 CCT6AP40227 531 aaKnown RBP25.75■■□□□ 1.71
LSM7-202ENST00000585395 NASPP49321 788 aaPredicted RBP25.75■■□□□ 1.71
LSM7-202ENST00000585395 CLCN3P51790 818 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 CEBPZQ03701 1054 aaKnown RBP25.75■■□□□ 1.71
LSM7-202ENST00000585395 ODR4Q5SWX8 454 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 KIAA0319LQ8IZA0 1049 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 KCTD17Q8N5Z5 321 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 SNX29Q8TEQ0 813 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 NACC1Q96RE7 527 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 YME1L1Q96TA2 773 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 SQORQ9Y6N5 450 aa25.75■■□□□ 1.71
LSM7-202ENST00000585395 YEATS4O95619 227 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 VTNP04004 478 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 NFX1Q12986 1120 aaKnown RBP25.74■■□□□ 1.71
LSM7-202ENST00000585395 PKP1Q13835 747 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 SLC39A14Q15043 492 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 LRRC71Q8N4P6 559 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 CD320Q9NPF0 282 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 ANKEF1Q9NU02 776 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 INSL6Q9Y581 213 aa25.74■■□□□ 1.71
LSM7-202ENST00000585395 MYH15Q9Y2K3 1946 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 RPS6KA5O75582 802 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 PTPAQ15257 358 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 KIZQ2M2Z5 673 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 ZNF710Q8N1W2 664 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 CDK5RAP3Q96JB5 506 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 FTHL17Q9BXU8 183 aa25.73■■□□□ 1.71
LSM7-202ENST00000585395 CIZ1Q9ULV3 898 aaPredicted RBP25.73■■□□□ 1.71
LSM7-202ENST00000585395 COL4A4P53420 1690 aaPredicted RBP25.73■■□□□ 1.71
LSM7-202ENST00000585395 IBSPP21815 317 aaPredicted RBP25.72■■□□□ 1.71
LSM7-202ENST00000585395 TXLNAP40222 546 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 RFC5P40937 340 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 UBA7P41226 1012 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 CATSPER3Q86XQ3 398 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 KCNG4Q8TDN1 519 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 SLC7A3Q8WY07 619 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 CEP170P1Q96L14 293 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 NT5C3AQ9H0P0 336 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 AGO3Q9H9G7 860 aaKnown RBP25.72■■□□□ 1.71
LSM7-202ENST00000585395 CYP26B1Q9NR63 512 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 PADI3Q9ULW8 664 aa25.72■■□□□ 1.71
LSM7-202ENST00000585395 SRPRBQ9Y5M8 271 aaKnown RBP25.72■■□□□ 1.71
LSM7-202ENST00000585395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.71■■□□□ 1.71
LSM7-202ENST00000585395 LCHNA4D1U4 455 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms