RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 SSRP1Q08945 709 aaKnown RBP6.5□□□□□ -1.37
CRLF3-206ENST00000585268 AIMP1Q12904 312 aaKnown RBP6.5□□□□□ -1.37
CRLF3-206ENST00000585268 MROH9Q5TGP6 573 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 NSMFQ6X4W1 530 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 SPOCD1Q6ZMY3 1216 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 LCNL1Q6ZST4 164 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 USP53Q70EK8 1073 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 CEP68Q76N32 757 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 FAM129CQ86XR2 697 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 DCP2Q8IU60 420 aaKnown RBP6.5□□□□□ -1.37
CRLF3-206ENST00000585268 ZSCAN18Q8TBC5 510 aaPredicted RBP6.5□□□□□ -1.37
CRLF3-206ENST00000585268 PANK1Q8TE04 598 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 ALG3Q92685 438 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 TMEM169Q96HH4 297 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 RNF38Q9H0F5 515 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 DDX21Q9NR30 783 aaKnown RBP eCLIP6.5□□□□□ -1.37
CRLF3-206ENST00000585268 CD2APQ9Y5K6 639 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 FANCIQ9NVI1 1328 aa6.5□□□□□ -1.37
CRLF3-206ENST00000585268 RFXAPO00287 272 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 MSCO60682 206 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 SERPINB2P05120 415 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 PMLP29590 882 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 SLC6A11P48066 632 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 EXOSC9Q06265 439 aaKnown RBP6.49□□□□□ -1.37
CRLF3-206ENST00000585268 LSAMPQ13449 338 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 SLC9A5Q14940 896 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 ZNF385BQ569K4 471 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 COPS6Q7L5N1 327 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 TRMT2BQ96GJ1 504 aaKnown RBP6.49□□□□□ -1.37
CRLF3-206ENST00000585268 DNAJC2Q99543 621 aaKnown RBP6.49□□□□□ -1.37
CRLF3-206ENST00000585268 PHF20Q9BVI0 1012 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 IRF2BPLQ9H1B7 796 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 C4AP0C0L4 1744 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 COL24A1Q17RW2 1714 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 MAP3K15Q6ZN16 1313 aa6.49□□□□□ -1.37
CRLF3-206ENST00000585268 A0A0G2JLW4 131 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 BLACEA4D250 179 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 ERVV-1B6SEH8 477 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 H7BY64 318 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 SGSM2O43147 1006 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 NCAM1P13591 858 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 ATF2P15336 505 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 DPEP1P16444 411 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 PFKLP17858 780 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 GPTP24298 496 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 MC3RP41968 323 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
CRLF3-206ENST00000585268 TWISTNBQ3B726 338 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-206ENST00000585268 SOGA3Q5TF21 947 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 CLEC4GQ6UXB4 293 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-206ENST00000585268 KIF6Q6ZMV9 814 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 ZBTB38Q8NAP3 1195 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-206ENST00000585268 MKL1Q969V6 931 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 DBF4Q9UBU7 674 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-206ENST00000585268 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
CRLF3-206ENST00000585268 ZNF652Q9Y2D9 606 aa6.48□□□□□ -1.37
CRLF3-206ENST00000585268 CARMIL3Q8ND23 1372 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 ZSCAN22P10073 491 aaPredicted RBP6.47□□□□□ -1.37
CRLF3-206ENST00000585268 CHRNA5P30532 468 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 LIMS1P48059 325 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 TGFB2P61812 414 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 SLFN5Q08AF3 891 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 IFRD2Q12894 506 aaPredicted RBP6.47□□□□□ -1.37
CRLF3-206ENST00000585268 CCDC30Q5VVM6 783 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 FOXB2Q5VYV0 432 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 STYK1Q6J9G0 422 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 PRR5LQ6MZQ0 368 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 CNKSR3Q6P9H4 555 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 KCNT2Q6UVM3 1135 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 ZNF34Q8IZ26 560 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 DCAF4Q8WV16 495 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 SEC14L1Q92503 715 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 DACT3Q96B18 629 aaPredicted RBP6.47□□□□□ -1.37
CRLF3-206ENST00000585268 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
CRLF3-206ENST00000585268 MYH16Q9H6N6 1097 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 HYPKQ9NX55 129 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 CLDND1Q9NY35 253 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 PPARGC1AQ9UBK2 798 aaKnown RBP6.47□□□□□ -1.37
CRLF3-206ENST00000585268 C10orf71Q711Q0 1435 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 UBN2Q6ZU65 1347 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 KDM2BQ8NHM5 1336 aa6.47□□□□□ -1.37
CRLF3-206ENST00000585268 LAMB4A4D0S4 1761 aa6.46□□□□□ -1.37
CRLF3-206ENST00000585268 KCNA3P22001 575 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 GPR162Q16538 588 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 SUSD4Q5VX71 490 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 G2E3Q7L622 706 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 NBPF5PQ86XG9 351 aaPredicted RBP6.46□□□□□ -1.38
CRLF3-206ENST00000585268 SIAH1Q8IUQ4 282 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 TRMT2AQ8IZ69 625 aaKnown RBP6.46□□□□□ -1.38
CRLF3-206ENST00000585268 CNBD1Q8NA66 436 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 PLBD2Q8NHP8 589 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 CPA5Q8WXQ8 436 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 EXOC2Q96KP1 924 aa6.46□□□□□ -1.38
CRLF3-206ENST00000585268 PALD1Q9ULE6 856 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms