RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 U3KPZ7 1027 aaPredicted RBP20.62■□□□□ 0.89
TOP3A-220ENST00000585031 FANCMQ8IYD8 2048 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 DDAH1O94760 285 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 PPM1AP35813 382 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 ATAT1Q5SQI0 421 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 RALYLQ86SE5 291 aaKnown RBP20.61■□□□□ 0.89
TOP3A-220ENST00000585031 LRRC43Q8N309 656 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 CCDC82Q8N4S0 544 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 ZNF668Q96K58 619 aaPredicted RBP20.61■□□□□ 0.89
TOP3A-220ENST00000585031 CYP26B1Q9NR63 512 aa20.61■□□□□ 0.89
TOP3A-220ENST00000585031 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
TOP3A-220ENST00000585031 COL1A2P08123 1366 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 MEIS1O00470 390 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 DHX15O43143 795 aaKnown RBP20.6■□□□□ 0.89
TOP3A-220ENST00000585031 SLC26A2P50443 739 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 METAP2P50579 478 aaKnown RBP eCLIP20.6■□□□□ 0.89
TOP3A-220ENST00000585031 SART3Q15020 963 aaKnown RBP20.6■□□□□ 0.89
TOP3A-220ENST00000585031 ZNF484Q5JVG2 852 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 TMC5Q6UXY8 1006 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 ZNF598Q86UK7 904 aaKnown RBP20.6■□□□□ 0.89
TOP3A-220ENST00000585031 HELQQ8TDG4 1101 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 ZBP1Q9H171 429 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 ADAMTS10Q9H324 1103 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 SPTBN2O15020 2390 aa20.6■□□□□ 0.89
TOP3A-220ENST00000585031 BACH1O14867 736 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 GSPT1P15170 499 aaKnown RBP20.59■□□□□ 0.89
TOP3A-220ENST00000585031 KIF5BP33176 963 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 CLCN3P51790 818 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 BCAR1P56945 870 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 TDGQ13569 410 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 CEP55Q53EZ4 464 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 ODR4Q5SWX8 454 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 SWSAP1Q6NVH7 229 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 VPS52Q8N1B4 723 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 RNF169Q8NCN4 708 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 BCL7CQ8WUZ0 217 aaPredicted RBP20.59■□□□□ 0.89
TOP3A-220ENST00000585031 LZTS2Q9BRK4 669 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 R4GN57 208 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 CACNA1IQ9P0X4 2223 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 CACNA1GO43497 2377 aa20.59■□□□□ 0.89
TOP3A-220ENST00000585031 GPR179Q6PRD1 2367 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 NARSO43776 548 aaKnown RBP20.58■□□□□ 0.89
TOP3A-220ENST00000585031 FGFR4P22455 802 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 CA8P35219 290 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 NLRP11P59045 1033 aaKnown RBP20.58■□□□□ 0.89
TOP3A-220ENST00000585031 PDXDC2PQ6P474 469 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 TRMT1LQ7Z2T5 733 aaKnown RBP20.58■□□□□ 0.89
TOP3A-220ENST00000585031 SIX5Q8N196 739 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 METTL13Q8N6R0 699 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 LINC01465Q8N7H1 131 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 VN1R3Q9BXE9 311 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 ZNF302Q9NR11 478 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 DUSP12Q9UNI6 340 aa20.58■□□□□ 0.89
TOP3A-220ENST00000585031 DOCK8Q8NF50 2099 aa20.58■□□□□ 0.88
TOP3A-220ENST00000585031 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-220ENST00000585031 HOXA2O43364 376 aa20.57■□□□□ 0.88
TOP3A-220ENST00000585031 N4BP1O75113 896 aaKnown RBP20.57■□□□□ 0.88
TOP3A-220ENST00000585031 WWC2Q6AWC2 1192 aa20.57■□□□□ 0.88
TOP3A-220ENST00000585031 HEATR3Q7Z4Q2 680 aa20.57■□□□□ 0.88
TOP3A-220ENST00000585031 KCNK12Q9HB15 430 aa20.57■□□□□ 0.88
TOP3A-220ENST00000585031 CFAP47Q6ZTR5 3102 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 KRBA1A5PL33 1030 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 SH2B2O14492 632 aaPredicted RBP20.56■□□□□ 0.88
TOP3A-220ENST00000585031 FAM160B1Q5W0V3 765 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 ABI1Q8IZP0 508 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 ANO3Q9BYT9 981 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 DZANK1Q9NVP4 752 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 IRAK3Q9Y616 596 aa20.56■□□□□ 0.88
TOP3A-220ENST00000585031 A0A0U1RQF3 1178 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 FAM86B1E9PN63 330 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 ADAMTS3O15072 1205 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 PRC1O43663 620 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 B4GALT3O60512 393 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 CSDE1O75534 798 aaKnown RBP20.55■□□□□ 0.88
TOP3A-220ENST00000585031 FAM86B2P0C5J1 330 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 GNAQP50148 359 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 TMTC3Q6ZXV5 915 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 GPR149Q86SP6 731 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 LRRC71Q8N4P6 559 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 RSAD2Q8WXG1 361 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 RIN2Q8WYP3 895 aaPredicted RBP20.55■□□□□ 0.88
TOP3A-220ENST00000585031 RUBCNQ92622 972 aa20.55■□□□□ 0.88
TOP3A-220ENST00000585031 MAFBQ9Y5Q3 323 aaPredicted RBP20.55■□□□□ 0.88
TOP3A-220ENST00000585031 CTSAP10619 480 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 EIF4BP23588 611 aaKnown RBP20.54■□□□□ 0.88
TOP3A-220ENST00000585031 CHMLP26374 656 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 OTOP3Q7RTS5 596 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 DCLK2Q8N568 766 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 ACSF2Q96CM8 615 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-220ENST00000585031 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-220ENST00000585031 RIC8AQ9NPQ8 531 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 WNT16Q9UBV4 365 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 FBXL21Q9UKT6 434 aa20.54■□□□□ 0.88
TOP3A-220ENST00000585031 IGLV3-22A0A075B6J6 115 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 MEIS3P2A8K0S8 358 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 ZSCAN20P17040 1043 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-220ENST00000585031 ALDH7A1P49419 539 aaKnown RBP20.53■□□□□ 0.88
TOP3A-220ENST00000585031 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 EFCAB12Q6NXP0 572 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 CABP7Q86V35 215 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms