RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 PBX3P40426 434 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 SIGLEC14Q08ET2 396 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 TCF15Q12870 199 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 PDE12Q6L8Q7 609 aaKnown RBP23.15■■□□□ 1.3
SRSF1-206ENST00000583741 TMEM184AQ6ZMB5 413 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 FBXL16Q8N461 479 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 ASIC4Q96FT7 647 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 CASD1Q96PB1 797 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 AGXT2Q9BYV1 514 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 GLT8D2Q9H1C3 349 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 S1PR5Q9H228 398 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 LIMCH1Q9UPQ0 1083 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 LZTS1Q9Y250 596 aa23.15■■□□□ 1.3
SRSF1-206ENST00000583741 KLF18A0A0U1RQI7 1052 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 FSD2A1L4K1 749 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 CLCN3P51790 818 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 PTPN5P54829 565 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 PLCB3Q01970 1234 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 ANKRD54Q6NXT1 300 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 SYCE2Q6PIF2 218 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 MRPS27Q92552 414 aaKnown RBP23.14■■□□□ 1.29
SRSF1-206ENST00000583741 BRF1Q92994 677 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 TCF25Q9BQ70 676 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 ZNF577Q9BSK1 485 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 APOL5Q9BWW9 433 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 TMEM117Q9H0C3 514 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 DMDP11532 3685 aa23.14■■□□□ 1.29
SRSF1-206ENST00000583741 TECP42680 631 aa23.13■■□□□ 1.29
SRSF1-206ENST00000583741 VCPP55072 806 aaKnown RBP23.13■■□□□ 1.29
SRSF1-206ENST00000583741 PKN1Q16512 942 aa23.13■■□□□ 1.29
SRSF1-206ENST00000583741 ZNF746Q6NUN9 644 aaPredicted RBP23.13■■□□□ 1.29
SRSF1-206ENST00000583741 LLGL2Q6P1M3 1020 aa23.13■■□□□ 1.29
SRSF1-206ENST00000583741 RASGRP4Q8TDF6 673 aa23.13■■□□□ 1.29
SRSF1-206ENST00000583741 TMX3Q96JJ7 454 aa23.13■■□□□ 1.29
SRSF1-206ENST00000583741 LARP6Q9BRS8 491 aaKnown RBP23.13■■□□□ 1.29
SRSF1-206ENST00000583741 ENTPD7Q9NQZ7 604 aa23.13■■□□□ 1.29
SRSF1-206ENST00000583741 ZFHX2Q9C0A1 2572 aaPredicted RBP23.13■■□□□ 1.29
SRSF1-206ENST00000583741 PFKFB3Q16875 520 aaPredicted RBP23.12■■□□□ 1.29
SRSF1-206ENST00000583741 KCNT2Q6UVM3 1135 aa23.12■■□□□ 1.29
SRSF1-206ENST00000583741 TBC1D22BQ9NU19 505 aa23.12■■□□□ 1.29
SRSF1-206ENST00000583741 GABBR1Q9UBS5 961 aa23.12■■□□□ 1.29
SRSF1-206ENST00000583741 CDH22Q9UJ99 828 aa23.12■■□□□ 1.29
SRSF1-206ENST00000583741 SRGAP2BP0DMP2 458 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 SP100P23497 879 aaPredicted RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 NLRP11P59045 1033 aaKnown RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 SETQ01105 290 aaPredicted RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 PTPN21Q16825 1174 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 SMAP1Q8IYB5 467 aaPredicted RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 LINC01465Q8N7H1 131 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 ZSCAN31Q96LW9 406 aaPredicted RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 ADAMTS10Q9H324 1103 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 TPCN1Q9ULQ1 816 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 ADD1P35611 737 aaKnown RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 LRRC43Q8N309 656 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 LRRC71Q8N4P6 559 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 ZNF668Q96K58 619 aaPredicted RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 PRRX2Q99811 253 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 ZMYND12Q9H0C1 365 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 PUF60Q9UHX1 559 aaKnown RBP23.11■■□□□ 1.29
SRSF1-206ENST00000583741 AKT3Q9Y243 479 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 PCDHA10Q9Y5I2 948 aa23.11■■□□□ 1.29
SRSF1-206ENST00000583741 VPS13AQ96RL7 3174 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 ESYT2A0FGR8 921 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 PSAPP07602 524 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 CLLU1OSQ5K130 101 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 EFCAB12Q6NXP0 572 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 ZNF558Q96NG5 402 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 NGRNQ9NPE2 291 aaKnown RBP23.1■■□□□ 1.29
SRSF1-206ENST00000583741 CEP131Q9UPN4 1083 aa23.1■■□□□ 1.29
SRSF1-206ENST00000583741 MYO10Q9HD67 2058 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 HOXA2O43364 376 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 RCAN1P53805 252 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 PRR16Q569H4 304 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 ECHDC2Q86YB7 292 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 REXO1Q8N1G1 1221 aaKnown RBP23.09■■□□□ 1.29
SRSF1-206ENST00000583741 LENG9Q96B70 501 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 MAP7D2Q96T17 732 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 SH2B1Q9NRF2 756 aaPredicted RBP23.09■■□□□ 1.29
SRSF1-206ENST00000583741 FAM86C1Q9NVL1 165 aa23.09■■□□□ 1.29
SRSF1-206ENST00000583741 NAP1L2Q9ULW6 460 aaPredicted RBP23.09■■□□□ 1.29
SRSF1-206ENST00000583741 MAGEB2O15479 319 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 ZNF862O60290 1169 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 LARGE1O95461 756 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
SRSF1-206ENST00000583741 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.29
SRSF1-206ENST00000583741 PPM1AP35813 382 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 TMC7Q7Z402 723 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 ABI1Q8IZP0 508 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 RNF169Q8NCN4 708 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 TCEAL9Q9UHQ7 104 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 SAMM50Q9Y512 469 aa23.08■■□□□ 1.29
SRSF1-206ENST00000583741 PDGFBP01127 241 aaPredicted RBP23.07■■□□□ 1.28
SRSF1-206ENST00000583741 ZSCAN20P17040 1043 aaPredicted RBP23.07■■□□□ 1.28
SRSF1-206ENST00000583741 HOXB8P17481 243 aaPredicted RBP23.07■■□□□ 1.28
SRSF1-206ENST00000583741 METAP2P50579 478 aaKnown RBP eCLIP23.07■■□□□ 1.28
SRSF1-206ENST00000583741 EVCP57679 992 aa23.07■■□□□ 1.28
SRSF1-206ENST00000583741 ME3Q16798 604 aa23.07■■□□□ 1.28
SRSF1-206ENST00000583741 FAM167AQ96KS9 214 aa23.07■■□□□ 1.28
SRSF1-206ENST00000583741 C6orf50Q9HD87 102 aa23.07■■□□□ 1.28
SRSF1-206ENST00000583741 SPG21Q9NZD8 308 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms