RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 PADI6Q6TGC4 694 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 TSHZ1Q6ZSZ6 1077 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 ASAP3Q8TDY4 903 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 JPH2Q9BR39 696 aaPredicted RBP18.27■□□□□ 0.52
RNF43-206ENST00000582293 ATP6V0A4Q9HBG4 840 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 GPRC5CQ9NQ84 441 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 GINS2Q9Y248 185 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 RBM19Q9Y4C8 960 aaKnown RBP18.27■□□□□ 0.52
RNF43-206ENST00000582293 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
RNF43-206ENST00000582293 A0A087WZ62 844 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 M0QZ92 97 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 SLC26A4O43511 780 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 GAS2O43903 313 aaKnown RBP18.26■□□□□ 0.51
RNF43-206ENST00000582293 CYP11B2P19099 503 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 PLCG1P19174 1290 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 UBA7P41226 1012 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 NUCB2P80303 420 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 HABP4Q5JVS0 413 aaKnown RBP18.26■□□□□ 0.51
RNF43-206ENST00000582293 SHC4Q6S5L8 630 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 FAM228AQ86W67 206 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 RHPN2Q8IUC4 686 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 PRPF31Q8WWY3 499 aaKnown RBP18.26■□□□□ 0.51
RNF43-206ENST00000582293 LINC01599Q8WXQ3 324 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
RNF43-206ENST00000582293 FDXACB1Q9BRP7 624 aaPredicted RBP18.26■□□□□ 0.51
RNF43-206ENST00000582293 RUSC1Q9BVN2 902 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
RNF43-206ENST00000582293 TMX1Q9H3N1 280 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 IFT122Q9HBG6 1241 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 ERVK-5Q9HDB9 667 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 PCDHA7Q9UN72 937 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 DNM3Q9UQ16 869 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 COL4A3BPQ9Y5P4 624 aa18.26■□□□□ 0.51
RNF43-206ENST00000582293 MICAL3Q7RTP6 2002 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.25■□□□□ 0.51
RNF43-206ENST00000582293 ARHGEF35A5YM69 484 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 SOX1O00570 391 aaPredicted RBP18.25■□□□□ 0.51
RNF43-206ENST00000582293 DARSP14868 501 aaKnown RBP18.25■□□□□ 0.51
RNF43-206ENST00000582293 GLRA2P23416 452 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 DNM2P50570 870 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 SLC12A3P55017 1021 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 LAMTOR4Q0VGL1 99 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 C1orf186Q6ZWK4 172 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 MAEAQ7L5Y9 396 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 RTN4RL1Q86UN2 441 aaPredicted RBP18.25■□□□□ 0.51
RNF43-206ENST00000582293 EXOC8Q8IYI6 725 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 LEO1Q8WVC0 666 aaPredicted RBP18.25■□□□□ 0.51
RNF43-206ENST00000582293 PSPC1Q8WXF1 523 aaKnown RBP18.25■□□□□ 0.51
RNF43-206ENST00000582293 NT5C3AQ9H0P0 336 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 TCHHQ07283 1943 aa18.25■□□□□ 0.51
RNF43-206ENST00000582293 MGEA5O60502 916 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 CUTAO60888 179 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 CSDE1O75534 798 aaKnown RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 WDR5P61964 334 aaKnown RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 DEFB103AP81534 67 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 CAPSQ13938 189 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.24■□□□□ 0.51
RNF43-206ENST00000582293 DAW1Q8N136 415 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 KCTD17Q8N5Z5 321 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 SYT2Q8N9I0 419 aaPredicted RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 USP38Q8NB14 1042 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 KCNG4Q8TDN1 519 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 BSNDQ8WZ55 320 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 SEPT8Q92599 483 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 CCDC43Q96MW1 224 aaKnown RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 POLR3FQ9H1D9 316 aaPredicted RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 MINDY3Q9H8M7 445 aa18.24■□□□□ 0.51
RNF43-206ENST00000582293 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
RNF43-206ENST00000582293 TRIOBPQ9H2D6 2365 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 ABHD14A-ACY1A0A1B0GW23 586 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 PLA2G4BP0C869 781 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 ACTN1P12814 892 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 FGFR4P22455 802 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 KRT85P78386 507 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 MAPK7Q13164 816 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 ARSHQ5FYA8 562 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 TMCO2Q7Z6W1 182 aaPredicted RBP18.23■□□□□ 0.51
RNF43-206ENST00000582293 ZNF410Q86VK4 478 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 ZNF710Q8N1W2 664 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 MCPH1Q8NEM0 835 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 NLRP7Q8WX94 980 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 CALML4Q96GE6 196 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 NLRP4Q96MN2 994 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 ST3GAL5Q9UNP4 418 aa18.23■□□□□ 0.51
RNF43-206ENST00000582293 ZBBXA8MT70 800 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 RPS6KA5O75582 802 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 PAK2Q13177 524 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 IKBKEQ14164 716 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 MCM6Q14566 821 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 RAD54LQ92698 747 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms