RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 COASYQ13057 564 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 PSMD2Q13200 908 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 LY6KQ17RY6 165 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 ARSHQ5FYA8 562 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 HPS3Q969F9 1004 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 TRIM44Q96DX7 344 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 SENP7Q9BQF6 1050 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 ZHX3Q9H4I2 956 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 SLC39A2Q9NP94 309 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 IL23AQ9NPF7 189 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-204ENST00000581979 SLC9A2Q9UBY0 812 aa13.93□□□□□ -0.18
SRSF1-204ENST00000581979 WDR81Q562E7 1941 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 SORBS3O60504 671 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 GH1P01241 217 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 SP4Q02446 784 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 PTPN11Q06124 597 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-204ENST00000581979 NBPF20Q3BBV1 942 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 SMAP1Q8IYB5 467 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-204ENST00000581979 EMID1Q96A84 441 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-204ENST00000581979 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 MED15Q96RN5 788 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 HSD3B7Q9H2F3 369 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 TTYH1Q9H313 450 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-204ENST00000581979 TRMT13Q9NUP7 481 aaKnown RBP13.92□□□□□ -0.18
SRSF1-204ENST00000581979 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
SRSF1-204ENST00000581979 PCDHA10Q9Y5I2 948 aa13.92□□□□□ -0.18
SRSF1-204ENST00000581979 CDH23Q9H251 3354 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 PTMAP06454 111 aaKnown RBP13.91□□□□□ -0.18
SRSF1-204ENST00000581979 PSAPP07602 524 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 MMP3P08254 477 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 ACRP10323 421 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
SRSF1-204ENST00000581979 PSMC5P62195 406 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 GIT2Q14161 759 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 HERC4Q5GLZ8 1057 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-204ENST00000581979 RINT1Q6NUQ1 792 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 ZNF365Q70YC5 407 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 KIAA0895Q8NCT3 520 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 AFG1LQ8WV93 481 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 DHTKD1Q96HY7 919 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-204ENST00000581979 REEP2Q9BRK0 252 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 RUSC1Q9BVN2 902 aa13.91□□□□□ -0.18
SRSF1-204ENST00000581979 ZBTB39O15060 712 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 DKC1O60832 514 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 TBCAO75347 108 aaKnown RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 LYPLA2O95372 231 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 SERPINC1P01008 464 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 ATP1A3P13637 1013 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 FANCCQ00597 558 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 SP2Q02086 613 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 EHHADHQ08426 723 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 FAM26FQ5R3K3 315 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 DRC7Q8IY82 874 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 SLC17A8Q8NDX2 589 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 HERVK_113Q902F9 699 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 CDX2Q99626 313 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 BCAS3Q9H6U6 928 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 A0A0C4DFX4 3053 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 UBA1P22314 1058 aaKnown RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 DNAJB2P25686 324 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 CCL23P55773 120 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 ACTR2P61160 394 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 NEDD9Q14511 834 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 UGCGQ16739 394 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 MIS18BP1Q6P0N0 1132 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 KCNV1Q6PIU1 500 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 SESTD1Q86VW0 696 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 ATP6V0A1Q93050 837 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 P2RX5Q93086 422 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 MRFAP1L1Q96HT8 127 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 KCND2Q9NZV8 630 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 TBC1D7Q9P0N9 293 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 IFNKQ9P0W0 207 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
SRSF1-204ENST00000581979 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
SRSF1-204ENST00000581979 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 TRIM49BA6NDI0 452 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 CBFA2T2O43439 604 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 FAM13AO94988 1023 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 FGBP02675 491 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 TGFB3P10600 412 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 CYP2C9P11712 490 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 CCNE1P24864 410 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
SRSF1-204ENST00000581979 LAMC2Q13753 1193 aa13.89□□□□□ -0.19
SRSF1-204ENST00000581979 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms