RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 EIF2AK1Q9BQI3 630 aaKnown RBP21.83■■□□□ 1.09
SREBF1-220ENST00000581707 TMEM60Q9H2L4 133 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 RNF216Q9NWF9 866 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-220ENST00000581707 SUCLA2Q9P2R7 463 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-220ENST00000581707 CUL9Q8IWT3 2517 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 RALGAPA2Q2PPJ7 1873 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 CD2BP2O95400 341 aaKnown RBP21.82■■□□□ 1.08
SREBF1-220ENST00000581707 DARSP14868 501 aaKnown RBP21.82■■□□□ 1.08
SREBF1-220ENST00000581707 IBSPP21815 317 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-220ENST00000581707 YWHABP31946 246 aaKnown RBP21.82■■□□□ 1.08
SREBF1-220ENST00000581707 MCM2P49736 904 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 NOSTRINQ8IVI9 506 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 EXOC8Q8IYI6 725 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 ZNF579Q8NAF0 562 aaKnown RBP21.82■■□□□ 1.08
SREBF1-220ENST00000581707 SLC7A3Q8WY07 619 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 KIF3AQ9Y496 699 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 PPME1Q9Y570 386 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 PCDHB7Q9Y5E2 793 aa21.82■■□□□ 1.08
SREBF1-220ENST00000581707 C9IYK1 514 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 DLL1O00548 723 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 POLGP54098 1239 aaPredicted RBP21.81■■□□□ 1.08
SREBF1-220ENST00000581707 DSC3Q14574 896 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 SKIV2LQ15477 1246 aaKnown RBP21.81■■□□□ 1.08
SREBF1-220ENST00000581707 ZNF174Q15697 407 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 RHPN2Q8IUC4 686 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 CMTR2Q8IYT2 770 aaKnown RBP21.81■■□□□ 1.08
SREBF1-220ENST00000581707 CLP1Q92989 425 aaKnown RBP21.81■■□□□ 1.08
SREBF1-220ENST00000581707 HSD17B14Q9BPX1 270 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 GCOM2Q9BZD3 368 aaPredicted RBP21.81■■□□□ 1.08
SREBF1-220ENST00000581707 THEGQ9P2T0 379 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 RWDD3Q9Y3V2 267 aa21.81■■□□□ 1.08
SREBF1-220ENST00000581707 H3BNC9 293 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 ZBTB39O15060 712 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 CTNNB1P35222 781 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 BMPR1AP36894 532 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 RFC5P40937 340 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 FAM189BP81408 668 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 ORC2Q13416 577 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-220ENST00000581707 GPM6BQ13491 265 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 XKR9Q5GH70 373 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 NEK9Q8TD19 979 aa21.8■■□□□ 1.08
SREBF1-220ENST00000581707 DHX33Q9H6R0 707 aaKnown RBP21.8■■□□□ 1.08
SREBF1-220ENST00000581707 A0A087WZ62 844 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 CSDE1O75534 798 aaKnown RBP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 RB1P06400 928 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 LINC00271P0C7V0 271 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 ZSCAN20P17040 1043 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 FGFR4P22455 802 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 U2AF2P26368 475 aaKnown RBP eCLIP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 TRAPPC10P48553 1259 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 PAN2Q504Q3 1202 aaKnown RBP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 TTC38Q5R3I4 469 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 ZNF410Q86VK4 478 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 KSR1Q8IVT5 923 aa21.79■■□□□ 1.08
SREBF1-220ENST00000581707 ATXN2LQ8WWM7 1075 aaKnown RBP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 FDXACB1Q9BRP7 624 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 NOL7Q9UMY1 257 aaKnown RBP21.79■■□□□ 1.08
SREBF1-220ENST00000581707 VCANP13611 3396 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 POTEMA6NI47 508 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 LYPLA2O95372 231 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 GATMP50440 423 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 PTPROQ16827 1216 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 MRPL38Q96DV4 380 aaKnown RBP21.78■■□□□ 1.08
SREBF1-220ENST00000581707 NLRP4Q96MN2 994 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 INO80BQ9C086 356 aaPredicted RBP21.78■■□□□ 1.08
SREBF1-220ENST00000581707 ATP6V0A4Q9HBG4 840 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 TMEM161AQ9NX61 479 aa21.78■■□□□ 1.08
SREBF1-220ENST00000581707 MRPL42Q9Y6G3 142 aaKnown RBP21.78■■□□□ 1.08
SREBF1-220ENST00000581707 C5orf67F2Z3F1 127 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 GAS2O43903 313 aaKnown RBP21.77■■□□□ 1.08
SREBF1-220ENST00000581707 OR52Z1P0C646 297 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 TECP42680 631 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 TCP11Q8WWU5 503 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 PSPC1Q8WXF1 523 aaKnown RBP21.77■■□□□ 1.08
SREBF1-220ENST00000581707 TMEM143Q96AN5 459 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 C11orf84Q9BUA3 381 aaPredicted RBP21.77■■□□□ 1.08
SREBF1-220ENST00000581707 ELAC1Q9H777 363 aaKnown RBP21.77■■□□□ 1.08
SREBF1-220ENST00000581707 BMP2KQ9NSY1 1161 aaPredicted RBP21.77■■□□□ 1.08
SREBF1-220ENST00000581707 ANKEF1Q9NU02 776 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 COL4A3BPQ9Y5P4 624 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 ARID2Q68CP9 1835 aa21.77■■□□□ 1.08
SREBF1-220ENST00000581707 GJB2P29033 226 aa21.76■■□□□ 1.07
SREBF1-220ENST00000581707 MRPS5P82675 430 aaKnown RBP21.76■■□□□ 1.07
SREBF1-220ENST00000581707 EMC2Q15006 297 aa21.76■■□□□ 1.07
SREBF1-220ENST00000581707 FNDC1Q4ZHG4 1894 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-220ENST00000581707 TJAP1Q5JTD0 557 aa21.76■■□□□ 1.07
SREBF1-220ENST00000581707 FAM102BQ5T8I3 360 aa21.76■■□□□ 1.07
SREBF1-220ENST00000581707 PRPF31Q8WWY3 499 aaKnown RBP21.76■■□□□ 1.07
SREBF1-220ENST00000581707 PLVAPQ9BX97 442 aa21.76■■□□□ 1.07
SREBF1-220ENST00000581707 COL25A1Q9BXS0 654 aaPredicted RBP21.76■■□□□ 1.07
SREBF1-220ENST00000581707 XRCC6P12956 609 aaKnown RBP eCLIP21.75■■□□□ 1.07
SREBF1-220ENST00000581707 SFPQP23246 707 aaKnown RBP eCLIP21.75■■□□□ 1.07
SREBF1-220ENST00000581707 LAMTOR4Q0VGL1 99 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 NBR1Q14596 966 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 MCTP1Q6DN14 999 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 PIGOQ8TEQ8 1089 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 ASB2Q96Q27 587 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 MTRQ99707 1265 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 BACH2Q9BYV9 841 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 IFT122Q9HBG6 1241 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms