RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 C1QTNF1Q9BXJ1 281 aa23.51■■□□□ 1.35
CCDC42-203ENST00000581598 AAASQ9NRG9 546 aa23.51■■□□□ 1.35
CCDC42-203ENST00000581598 ORC3Q9UBD5 711 aaPredicted RBP23.51■■□□□ 1.35
CCDC42-203ENST00000581598 SEPT9Q9UHD8 586 aaPredicted RBP23.51■■□□□ 1.35
CCDC42-203ENST00000581598 IL9P15248 144 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 ZSCAN20P17040 1043 aaPredicted RBP23.5■■□□□ 1.35
CCDC42-203ENST00000581598 LTBRP36941 435 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 UBE3AQ05086 875 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 HYAL1Q12794 435 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 FAM102BQ5T8I3 360 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 PPP2R3CQ969Q6 453 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 CLDND1Q9NY35 253 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 VAV3Q9UKW4 847 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 FAM50BQ9Y247 325 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 PCDHB12Q9Y5F1 795 aa23.5■■□□□ 1.35
CCDC42-203ENST00000581598 TBKBP1A7MCY6 615 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 H3BQ06 376 aaPredicted RBP23.49■■□□□ 1.35
CCDC42-203ENST00000581598 HOXA2O43364 376 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 DKC1O60832 514 aaKnown RBP eCLIP23.49■■□□□ 1.35
CCDC42-203ENST00000581598 DNAJB1P25685 340 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 CSPP1Q1MSJ5 1256 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 MTERF2Q49AM1 385 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 POF1BQ8WVV4 589 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 GJB4Q9NTQ9 266 aa23.49■■□□□ 1.35
CCDC42-203ENST00000581598 EML1O00423 815 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 MAFO75444 373 aaPredicted RBP23.48■■□□□ 1.35
CCDC42-203ENST00000581598 FDPSP14324 419 aaKnown RBP23.48■■□□□ 1.35
CCDC42-203ENST00000581598 DNM2P50570 870 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 ME3Q16798 604 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 PIK3AP1Q6ZUJ8 805 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 OXER1Q8TDS5 423 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 GTF3C6Q969F1 213 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 KIF2CQ99661 725 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 JPH2Q9BR39 696 aaPredicted RBP23.48■■□□□ 1.35
CCDC42-203ENST00000581598 TMEM117Q9H0C3 514 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 PPME1Q9Y570 386 aa23.48■■□□□ 1.35
CCDC42-203ENST00000581598 P4HBP07237 508 aaKnown RBP23.47■■□□□ 1.35
CCDC42-203ENST00000581598 QARSP47897 775 aaKnown RBP23.47■■□□□ 1.35
CCDC42-203ENST00000581598 DRP2Q13474 957 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 ANO5Q75V66 913 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 ZNF410Q86VK4 478 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 NLRP7Q8WX94 980 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 HAS1Q92839 578 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 GCOM2Q9BZD3 368 aaPredicted RBP23.47■■□□□ 1.35
CCDC42-203ENST00000581598 CWH43Q9H720 699 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 CD320Q9NPF0 282 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 TYW1Q9NV66 732 aaKnown RBP23.47■■□□□ 1.35
CCDC42-203ENST00000581598 PRKAG3Q9UGI9 489 aa23.47■■□□□ 1.35
CCDC42-203ENST00000581598 TMEM150BA6NC51 233 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 DDX11L8A8MPP1 907 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 CCNT1O60563 726 aaKnown RBP23.46■■□□□ 1.35
CCDC42-203ENST00000581598 FGFR1P11362 822 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 LAG3P18627 525 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 IBSPP21815 317 aaPredicted RBP23.46■■□□□ 1.35
CCDC42-203ENST00000581598 ADAM15Q13444 863 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 SPOUT1Q5T280 376 aaKnown RBP23.46■■□□□ 1.35
CCDC42-203ENST00000581598 EP400NLQ6ZTU2 488 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 ECHDC2Q86YB7 292 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 GJD3Q8N144 294 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 COLGALT1Q8NBJ5 622 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 TNFRSF25Q93038 417 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 SCLT1Q96NL6 688 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 CASD1Q96PB1 797 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 CHST12Q9NRB3 414 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 RNF19AQ9NV58 838 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 DACT1Q9NYF0 836 aa23.46■■□□□ 1.35
CCDC42-203ENST00000581598 A0A0U1RQF3 1178 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 LARGE1O95461 756 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 EOMESO95936 686 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 IRS1P35568 1242 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 KRT2P35908 639 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 EPHA7Q15375 998 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 EARS2Q5JPH6 523 aaKnown RBP23.45■■□□□ 1.34
CCDC42-203ENST00000581598 EXOC8Q8IYI6 725 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 NECAB1Q8N987 351 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 NSUN7Q8NE18 718 aaKnown RBP23.45■■□□□ 1.34
CCDC42-203ENST00000581598 ZNF668Q96K58 619 aaPredicted RBP23.45■■□□□ 1.34
CCDC42-203ENST00000581598 TRAIPQ9BWF2 469 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 INO80BQ9C086 356 aaPredicted RBP23.45■■□□□ 1.34
CCDC42-203ENST00000581598 EPHX3Q9H6B9 360 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 BRMS1Q9HCU9 246 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 CYP26B1Q9NR63 512 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 LZTS1Q9Y250 596 aa23.45■■□□□ 1.34
CCDC42-203ENST00000581598 FGF18O76093 207 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 GTF2F1P35269 517 aaKnown RBP eCLIP23.44■■□□□ 1.34
CCDC42-203ENST00000581598 PLCB3Q01970 1234 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 DLX2Q07687 328 aaPredicted RBP23.44■■□□□ 1.34
CCDC42-203ENST00000581598 PDE12Q6L8Q7 609 aaKnown RBP23.44■■□□□ 1.34
CCDC42-203ENST00000581598 ZNF598Q86UK7 904 aaKnown RBP23.44■■□□□ 1.34
CCDC42-203ENST00000581598 C4orf19Q8IY42 314 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 SLFN12Q8IYM2 578 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 LRRC43Q8N309 656 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 EFHBQ8N7U6 833 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 RSPH1Q8WYR4 309 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
CCDC42-203ENST00000581598 SUCLA2Q9P2R7 463 aaPredicted RBP23.44■■□□□ 1.34
CCDC42-203ENST00000581598 A0A087WZ62 844 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 PI4K2BG5E9Z4 385 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 TBX10O75333 385 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 BAG4O95429 457 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms