RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 CSDE1O75534 798 aaKnown RBP30.01■■■□□ 2.39
LINC00271-207ENST00000580741 DARSP14868 501 aaKnown RBP30.01■■■□□ 2.39
LINC00271-207ENST00000580741 SARSP49591 514 aaKnown RBP30.01■■■□□ 2.39
LINC00271-207ENST00000580741 BTG3Q14201 252 aaPredicted RBP30.01■■■□□ 2.39
LINC00271-207ENST00000580741 PAN2Q504Q3 1202 aaKnown RBP30.01■■■□□ 2.39
LINC00271-207ENST00000580741 RHPN2Q8IUC4 686 aa30.01■■■□□ 2.39
LINC00271-207ENST00000580741 KSR1Q8IVT5 923 aa30.01■■■□□ 2.39
LINC00271-207ENST00000580741 TMEM192Q8IY95 271 aa30.01■■■□□ 2.39
LINC00271-207ENST00000580741 LRFN2Q9ULH4 789 aa30.01■■■□□ 2.39
LINC00271-207ENST00000580741 A0A087WZ62 844 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 STAG3L1P0CL83 205 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 MCM2P49736 904 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 POLGP54098 1239 aaPredicted RBP30■■■□□ 2.39
LINC00271-207ENST00000580741 DSC3Q14574 896 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 XKR9Q5GH70 373 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 ZNF710Q8N1W2 664 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 SAMD11Q96NU1 681 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 HSD17B14Q9BPX1 270 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 FDXACB1Q9BRP7 624 aaPredicted RBP30■■■□□ 2.39
LINC00271-207ENST00000580741 BACH2Q9BYV9 841 aa30■■■□□ 2.39
LINC00271-207ENST00000580741 A0A087WWV3 80 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 OR52Z1P0C646 297 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 LINC00271P0C7V0 271 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 U2AF2P26368 475 aaKnown RBP eCLIP29.99■■■□□ 2.39
LINC00271-207ENST00000580741 GJB2P29033 226 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 CTNNB1P35222 781 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 OTUD6AQ7L8S5 288 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 IL27Q8NEV9 243 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 SLC7A3Q8WY07 619 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 TMEM143Q96AN5 459 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 NLRP4Q96MN2 994 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 JPH2Q9BR39 696 aaPredicted RBP29.99■■■□□ 2.39
LINC00271-207ENST00000580741 DHX33Q9H6R0 707 aaKnown RBP29.99■■■□□ 2.39
LINC00271-207ENST00000580741 C1orf112Q9NSG2 853 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 NOL7Q9UMY1 257 aaKnown RBP29.99■■■□□ 2.39
LINC00271-207ENST00000580741 KIF3AQ9Y496 699 aa29.99■■■□□ 2.39
LINC00271-207ENST00000580741 REV3LO60673 3130 aa29.98■■■□□ 2.39
LINC00271-207ENST00000580741 C9IYK1 514 aa29.98■■■□□ 2.39
LINC00271-207ENST00000580741 SKIV2LQ15477 1246 aaKnown RBP29.98■■■□□ 2.39
LINC00271-207ENST00000580741 SLC24A5Q71RS6 500 aa29.98■■■□□ 2.39
LINC00271-207ENST00000580741 NEK9Q8TD19 979 aa29.98■■■□□ 2.39
LINC00271-207ENST00000580741 PCDHB7Q9Y5E2 793 aa29.98■■■□□ 2.39
LINC00271-207ENST00000580741 MRPL42Q9Y6G3 142 aaKnown RBP29.98■■■□□ 2.39
LINC00271-207ENST00000580741 RFC5P40937 340 aa29.97■■■□□ 2.39
LINC00271-207ENST00000580741 TECP42680 631 aa29.97■■■□□ 2.39
LINC00271-207ENST00000580741 EMC2Q15006 297 aa29.97■■■□□ 2.39
LINC00271-207ENST00000580741 MCTP1Q6DN14 999 aa29.97■■■□□ 2.39
LINC00271-207ENST00000580741 GCOM2Q9BZD3 368 aaPredicted RBP29.97■■■□□ 2.39
LINC00271-207ENST00000580741 VCANP13611 3396 aa29.97■■■□□ 2.39
LINC00271-207ENST00000580741 TRAPPC10P48553 1259 aa29.96■■■□□ 2.39
LINC00271-207ENST00000580741 TOB1P50616 345 aaPredicted RBP29.96■■■□□ 2.39
LINC00271-207ENST00000580741 ORC2Q13416 577 aaPredicted RBP29.96■■■□□ 2.39
LINC00271-207ENST00000580741 GPM6BQ13491 265 aa29.96■■■□□ 2.39
LINC00271-207ENST00000580741 CMTR2Q8IYT2 770 aaKnown RBP29.96■■■□□ 2.39
LINC00271-207ENST00000580741 PPME1Q9Y570 386 aa29.96■■■□□ 2.39
LINC00271-207ENST00000580741 LYPLA2O95372 231 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 ZSCAN20P17040 1043 aaPredicted RBP29.95■■■□□ 2.39
LINC00271-207ENST00000580741 ZNF410Q86VK4 478 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 PIGOQ8TEQ8 1089 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 THEGQ9P2T0 379 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 SMC3Q9UQE7 1217 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 PCDHB6Q9Y5E3 794 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 COL4A3BPQ9Y5P4 624 aa29.95■■■□□ 2.39
LINC00271-207ENST00000580741 NLRC5Q86WI3 1866 aa29.95■■■□□ 2.38
LINC00271-207ENST00000580741 H3BNC9 293 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 SPATA31C1P0DKV0 1188 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 BMPR1AP36894 532 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 CDC42EP1Q00587 391 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 FAM102BQ5T8I3 360 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 C4orf32Q8N8J7 132 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 PRPF31Q8WWY3 499 aaKnown RBP29.94■■■□□ 2.38
LINC00271-207ENST00000580741 PSPC1Q8WXF1 523 aaKnown RBP29.94■■■□□ 2.38
LINC00271-207ENST00000580741 CLP1Q92989 425 aaKnown RBP29.94■■■□□ 2.38
LINC00271-207ENST00000580741 LMCD1Q9NZU5 365 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 GTF3C3Q9Y5Q9 886 aa29.94■■■□□ 2.38
LINC00271-207ENST00000580741 MED24O75448 989 aa29.93■■■□□ 2.38
LINC00271-207ENST00000580741 FGFR1P11362 822 aa29.93■■■□□ 2.38
LINC00271-207ENST00000580741 FAM189BP81408 668 aa29.93■■■□□ 2.38
LINC00271-207ENST00000580741 FAM43BQ6ZT52 329 aaPredicted RBP29.93■■■□□ 2.38
LINC00271-207ENST00000580741 CCDC43Q96MW1 224 aaKnown RBP29.93■■■□□ 2.38
LINC00271-207ENST00000580741 ATP6V0A4Q9HBG4 840 aa29.93■■■□□ 2.38
LINC00271-207ENST00000580741 XPNPEP1Q9NQW7 623 aa29.93■■■□□ 2.38
LINC00271-207ENST00000580741 ARID2Q68CP9 1835 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 TBKBP1A7MCY6 615 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 H3BQV1 296 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 SRGAP2CP0DJJ0 459 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 CATSPER3Q86XQ3 398 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 EXOC8Q8IYI6 725 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 MTRQ99707 1265 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 ANKEF1Q9NU02 776 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 TMEM161AQ9NX61 479 aa29.92■■■□□ 2.38
LINC00271-207ENST00000580741 RALGAPA2Q2PPJ7 1873 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 SFPQP23246 707 aaKnown RBP eCLIP29.91■■■□□ 2.38
LINC00271-207ENST00000580741 RARRES1P49788 294 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 LAMTOR4Q0VGL1 99 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 RNF169Q8NCN4 708 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 IFT122Q9HBG6 1241 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 HCSTQ9UBK5 93 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 RWDD3Q9Y3V2 267 aa29.91■■■□□ 2.38
LINC00271-207ENST00000580741 C5orf67F2Z3F1 127 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms