RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NPTX2P47972 431 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 DMP1Q13316 513 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MTF1Q14872 753 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 EMC2Q15006 297 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 DNTTIP2Q5QJE6 756 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KIFAP3Q92845 792 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CCDC169A6NNP5 214 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 STRNO43815 780 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CYP2J2P51589 502 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 STAT5BP51692 787 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GTF2BQ00403 316 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GJC2Q5T442 439 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TOGARAM2Q6ZUX3 1019 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PPP1R13BQ96KQ4 1090 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ACCSQ96QU6 501 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 FAM207AQ9NSI2 230 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MANSC4A6NHS7 340 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SLC10A3P09131 477 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KCNMA1Q12791 1236 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TTLL4Q14679 1199 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TAF1CQ15572 869 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TMEM161BQ8NDZ6 487 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SCFD2Q8WU76 684 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SPATA33Q96N06 139 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CEP89Q96ST8 783 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 EVPLQ92817 2033 aa16.27■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MGAMO43451 1857 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MARK3P27448 753 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MAPK4P31152 587 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 KCNH2Q12809 1159 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 FIGNQ5HY92 759 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TAPT1Q6NXT6 567 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DPP9Q86TI2 863 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 RETREG2Q8NC44 543 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DNAJC7Q99615 494 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DESI2Q9BSY9 194 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NUP58Q9BVL2 599 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NAA15Q9BXJ9 866 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NIFKQ9BYG3 293 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 KATNBL1Q9H079 304 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TMEM206Q9H813 350 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MMRN2Q9H8L6 949 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DMAC2Q9NW81 257 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DIS3Q9Y2L1 958 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-218ENST00000580391 LGR5O75473 907 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GOLGA5Q8TBA6 731 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 BORCS6Q96GS4 357 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 VTA1Q9NP79 307 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DENND3A2RUS2 1198 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 XRCC5P13010 732 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PSMC2P35998 433 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SMTNP53814 917 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TCERG1LQ5VWI1 586 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 OR8K1Q8NGG5 319 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SPIRE2Q8WWL2 714 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GLG1Q92896 1179 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SLC35C1Q96A29 364 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CBWD1Q9BRT8 395 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MKNK1Q9BUB5 465 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 C17orf75Q9HAS0 396 aa16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 METTL14Q9HCE5 456 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-218ENST00000580391 A0A1W2PQJ5 194 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SNAI1O95863 264 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 AFPP02771 609 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms