RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 TMPRSS4Q9NRS4 437 aa10□□□□□ -0.81
SENP3-203ENST00000580231 HOXC10Q9NYD6 342 aa10□□□□□ -0.81
SENP3-203ENST00000580231 FRMD4AQ9P2Q2 1039 aaPredicted RBP10□□□□□ -0.81
SENP3-203ENST00000580231 TRAF3IP3Q9Y228 551 aa10□□□□□ -0.81
SENP3-203ENST00000580231 ASTN2O75129 1339 aaPredicted RBP10□□□□□ -0.81
SENP3-203ENST00000580231 SMCHD1A6NHR9 2005 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 TTC26A0AVF1 554 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 B4DLN1 442 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 TRAF5O00463 557 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 PES1O00541 588 aaKnown RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 CETN3O15182 167 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 CALUO43852 315 aaPredicted RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 TBCAO75347 108 aaKnown RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 LYPLA2O95372 231 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 ARP10275 920 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 RPL13P26373 211 aaKnown RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 PSMC6P62333 389 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 TUBB2AQ13885 445 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 LRRC41Q15345 812 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 NFIL3Q16649 462 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 PTPN21Q16825 1174 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 MIIPQ5JXC2 388 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 RINT1Q6NUQ1 792 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 TRIM65Q6PJ69 517 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 RNF207Q6ZRF8 634 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 CATSPERGQ6ZRH7 1159 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 ZNF662Q6ZS27 426 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 LRRC55Q6ZSA7 311 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 C1orf186Q6ZWK4 172 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 EPM2AIP1Q7L775 607 aaPredicted RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 TPH2Q8IWU9 490 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 CCDC170Q8IYT3 715 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 CPXCR1Q8N123 301 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 RDM1Q8NG50 284 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 SCFD1Q8WVM8 642 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 ZNF592Q92610 1267 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 DYDC2Q96IM9 177 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 MAP7D2Q96T17 732 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 INSM2Q96T92 566 aaPredicted RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 TUBB2BQ9BVA1 445 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 TTYH3Q9C0H2 523 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 BHMT2Q9H2M3 363 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 KCTD10Q9H3F6 313 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 L2HGDHQ9H9P8 463 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 ADARB2Q9NS39 739 aaKnown RBP9.99□□□□□ -0.81
SENP3-203ENST00000580231 TMOD4Q9NZQ9 345 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 RNF181Q9P0P0 153 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 ODF2LQ9ULJ1 636 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 ZHX2Q9Y6X8 837 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 UBE4BO95155 1302 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 WDR90Q96KV7 1748 aa9.99□□□□□ -0.81
SENP3-203ENST00000580231 NFIBO00712 420 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 EIF3DO15371 548 aaKnown RBP eCLIP9.98□□□□□ -0.81
SENP3-203ENST00000580231 STAM2O75886 525 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 P4HBP07237 508 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 MAPTP10636 758 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 TAL1P17542 331 aaPredicted RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 ITGB5P18084 799 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 TRIM21P19474 475 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 GUCY2CP25092 1073 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 HNRNPH3P31942 346 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 RFC5P40937 340 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 HIRAP54198 1017 aaPredicted RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 RPS6P62753 249 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 KRT83P78385 493 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 MEA1Q16626 185 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 KNOP1Q1ED39 458 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 RAD9BQ6WBX8 426 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 SYT10Q6XYQ8 523 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 MIER3Q7Z3K6 550 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 FRMD5Q7Z6J6 570 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 REPS2Q8NFH8 660 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 TRPM4Q8TD43 1214 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 REEP2Q9BRK0 252 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 TIPINQ9BVW5 301 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 UNC45AQ9H3U1 944 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 ZSWIM4Q9H7M6 989 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 METTL14Q9HCE5 456 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 AGO4Q9HCK5 861 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 KCNH7Q9NS40 1196 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 MYO1AQ9UBC5 1043 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 DBR1Q9UK59 544 aaKnown RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 AFG3L2Q9Y4W6 797 aa9.98□□□□□ -0.81
SENP3-203ENST00000580231 EPN1Q9Y6I3 576 aaPredicted RBP9.98□□□□□ -0.81
SENP3-203ENST00000580231 LOXHD1Q8IVV2 1947 aa9.97□□□□□ -0.81
SENP3-203ENST00000580231 NPHP3-ACAD11A0A0J9YXS1 232 aa9.97□□□□□ -0.81
SENP3-203ENST00000580231 SOWAHDA6NJG2 315 aa9.97□□□□□ -0.81
SENP3-203ENST00000580231 RNF225M0QZC1 329 aaPredicted RBP9.97□□□□□ -0.81
SENP3-203ENST00000580231 DHX15O43143 795 aaKnown RBP9.97□□□□□ -0.81
SENP3-203ENST00000580231 DKC1O60832 514 aaKnown RBP eCLIP9.97□□□□□ -0.81
SENP3-203ENST00000580231 USP2O75604 605 aaPredicted RBP9.97□□□□□ -0.81
SENP3-203ENST00000580231 FAM13AO94988 1023 aa9.97□□□□□ -0.81
SENP3-203ENST00000580231 SLU7O95391 586 aaKnown RBP9.97□□□□□ -0.81
SENP3-203ENST00000580231 SFNP31947 248 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms