RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ITIH3Q06033 890 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 DSC3Q14574 896 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 RARS2Q5T160 578 aaKnown RBP21.97■■□□□ 1.11
LIMD2-209ENST00000580222 CES5AQ6NT32 575 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 CCDC105Q8IYK2 499 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 NME8Q8N427 588 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 NECTIN4Q96NY8 510 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 PPP1R16BQ96T49 567 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 ATP6V0A4Q9HBG4 840 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 JADE2Q9NQC1 790 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 C1orf112Q9NSG2 853 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 TMEM161AQ9NX61 479 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 AOC1P19801 751 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 UBE2SQ16763 222 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 FAM228AQ86W67 206 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 CYP2W1Q8TAV3 490 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 CUL5Q93034 780 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 CDHR1Q96JP9 859 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 SLKQ9H2G2 1235 aaPredicted RBP21.96■■□□□ 1.11
LIMD2-209ENST00000580222 LIMCH1Q9UPQ0 1083 aa21.96■■□□□ 1.11
LIMD2-209ENST00000580222 FNDC1Q4ZHG4 1894 aaPredicted RBP21.96■■□□□ 1.11
LIMD2-209ENST00000580222 KMT2BQ9UMN6 2715 aaPredicted RBP21.95■■□□□ 1.1
LIMD2-209ENST00000580222 CACNA1BQ00975 2339 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 CCDC196A0A1B0GTZ2 297 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 PLEKHA8P1O95397 391 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 CDC27P30260 824 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 ACTR2P61160 394 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 TMTC3Q6ZXV5 915 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 TDRD5Q8NAT2 981 aaKnown RBP21.95■■□□□ 1.1
LIMD2-209ENST00000580222 DTWD2Q8NBA8 298 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 LZTS2Q9BRK4 669 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 TMEM117Q9H0C3 514 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 AZI2Q9H6S1 392 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 JPH1Q9HDC5 661 aaPredicted RBP21.95■■□□□ 1.1
LIMD2-209ENST00000580222 SLC9A2Q9UBY0 812 aa21.95■■□□□ 1.1
LIMD2-209ENST00000580222 LARGE1O95461 756 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 MTHFRP42898 656 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 STAT5BP51692 787 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 ME3Q16798 604 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 PLPPR4Q7Z2D5 763 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 DGLUCYQ7Z3D6 616 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 KIAA2013Q8IYS2 634 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 ZNF558Q96NG5 402 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 NCOA5Q9HCD5 579 aaKnown RBP21.94■■□□□ 1.1
LIMD2-209ENST00000580222 SPG21Q9NZD8 308 aa21.94■■□□□ 1.1
LIMD2-209ENST00000580222 PFKFB2O60825 505 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 CD2BP2O95400 341 aaKnown RBP21.93■■□□□ 1.1
LIMD2-209ENST00000580222 EPCAMP16422 314 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 MCM2P49736 904 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 KIZQ2M2Z5 673 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 CMTR1Q8N1G2 835 aaKnown RBP21.93■■□□□ 1.1
LIMD2-209ENST00000580222 AUTS2Q8WXX7 1259 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 ZSCAN31Q96LW9 406 aaPredicted RBP21.93■■□□□ 1.1
LIMD2-209ENST00000580222 ELAC1Q9H777 363 aaKnown RBP21.93■■□□□ 1.1
LIMD2-209ENST00000580222 KCNH7Q9NS40 1196 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 R4GN57 208 aa21.93■■□□□ 1.1
LIMD2-209ENST00000580222 CNTNAP5Q8WYK1 1306 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 ZBTB42B2RXF5 422 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 CPLX1O14810 134 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 EOMESO95936 686 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 ADD1P35611 737 aaKnown RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 KRT17Q04695 432 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 SCRN1Q12765 414 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 ITGB3BPQ13352 177 aaPredicted RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 SMC1AQ14683 1233 aaKnown RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 KIAA1841Q6NSI8 718 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 CPLX2Q6PUV4 134 aaKnown RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 SLC39A11Q8N1S5 342 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 CCDC82Q8N4S0 544 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 SRBD1Q8N5C6 995 aaKnown RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 KCNG4Q8TDN1 519 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 OSMRQ99650 979 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 SPZ1Q9BXG8 430 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 PSTPIP2Q9H939 334 aa21.92■■□□□ 1.1
LIMD2-209ENST00000580222 FAM217BQ9NTX9 383 aaPredicted RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 DBR1Q9UK59 544 aaKnown RBP21.92■■□□□ 1.1
LIMD2-209ENST00000580222 CEP250Q9BV73 2442 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 LOXHD1Q8IVV2 1947 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 NT5C1B-RDH14C9J2C7 533 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 GPR182O15218 404 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 CXCL14O95715 111 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 CLLU1OSQ5K130 101 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 GTF3C6Q969F1 213 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 RRP36Q96EU6 259 aaKnown RBP21.91■■□□□ 1.1
LIMD2-209ENST00000580222 CYP26B1Q9NR63 512 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 SH2B1Q9NRF2 756 aaPredicted RBP21.91■■□□□ 1.1
LIMD2-209ENST00000580222 PCDHA6Q9UN73 950 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 USTQ9Y2C2 406 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 PCDHA8Q9Y5H6 950 aa21.91■■□□□ 1.1
LIMD2-209ENST00000580222 hCG_1642624A0A1W2PR95 340 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 GPR32O75388 356 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 ATG7O95352 703 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 CCNE2O96020 404 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 SMARCA1P28370 1054 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 ATAT1Q5SQI0 421 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 TMC5Q6UXY8 1006 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 SIX5Q8N196 739 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 PLCD3Q8N3E9 789 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 NECAB1Q8N987 351 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 SLC22A17Q8WUG5 538 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms