RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	GPC1	P35052	558 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	RFC5	P40937	340 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	RPS6	P62753	249 aa	Known RBP	7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	GAS6	Q14393	721 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	BMS1	Q14692	1282 aa	Known RBP	7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	STXBP2	Q15833	593 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	ALDH1L2	Q3SY69	923 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	FAM26D	Q5JW98	314 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	KIAA1841	Q6NSI8	718 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	PHLDB3	Q6NSJ2	640 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	SLC30A10	Q6XR72	485 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	KCTD1	Q719H9	257 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	TMEM87A	Q8NBN3	555 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	CHMP4C	Q96CF2	233 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	TCF25	Q9BQ70	676 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	KCNK12	Q9HB15	430 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	CA14	Q9ULX7	337 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	ADAMTS20	P59510	1910 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	IGKV6D-41	A0A0C4DH26	115 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TCRBV5S4A2T	A0A5A2	114 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	MINDY4B	A8MYZ0	360 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	C1QTNF9B	B2RNN3	333 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158		H3BRB1	525 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	FSCN2	O14926	492 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	FOXD2	O60548	495 aa	Predicted RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	WEE2	P0C1S8	567 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	C1QTNF9	P0C862	333 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TSPY3	P0CV98	308 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TSPY8	P0CW00	308 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TGM1	P22735	817 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	CSTF1	Q05048	431 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	RING1	Q06587	406 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	SPEM2	Q0P670	501 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TMEM259	Q4ZIN3	620 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	RARS2	Q5T160	578 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	CCDC149	Q6ZUS6	474 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TMC7	Q7Z402	723 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	RSPH3	Q86UC2	560 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	BEND7	Q8N7W2	519 aa	Predicted RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZNF837	Q96EG3	531 aa	Predicted RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	FTHL17	Q9BXU8	183 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	BCO2	Q9BYV7	579 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	EPC1	Q9H2F5	836 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	RANBP17	Q9H2T7	1088 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	RNPEP	Q9H4A4	650 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TUT1	Q9H6E5	874 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZSCAN32	Q9NX65	697 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	TLR7	Q9NYK1	1049 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	DDX41	Q9UJV9	622 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	LZTS1	Q9Y250	596 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	PCDHB9	Q9Y5E1	797 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	HCFC2	Q9Y5Z7	792 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	MRVI1	Q9Y6F6	885 aa		7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	7.02	□□□□□ -1.29
KPNB1-209	ENST00000580158		A0A1W2PRU2	124 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	EIF4E1B	A6NMX2	242 aa	Known RBP	7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	TAF4	O00268	1085 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	NARS	O43776	548 aa	Known RBP	7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	LRP3	O75074	770 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	SMIM10L2A	P0DMW4	78 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	SMIM10L2B	P0DMW5	78 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	CA8	P35219	290 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	KRT17	Q04695	432 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	DBN1	Q16643	649 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	SBK1	Q52WX2	424 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	RNF20	Q5VTR2	975 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	KCNV1	Q6PIU1	500 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZBTB44	Q8NCP5	570 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	NEDD1	Q8NHV4	660 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	NSUN6	Q8TEA1	469 aa	Known RBP	7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	MRPS27	Q92552	414 aa	Known RBP	7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	EAF2	Q96CJ1	260 aa	Predicted RBP	7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	SHD	Q96IW2	340 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	SPATA33	Q96N06	139 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	IWS1	Q96ST2	819 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	EHMT1	Q9H9B1	1298 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	PARD6A	Q9NPB6	346 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	DZANK1	Q9NVP4	752 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	DLGAP2	Q9P1A6	1054 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	NOB1	Q9ULX3	412 aa	Known RBP	7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	DYRK1B	Q9Y463	629 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	PCDHB7	Q9Y5E2	793 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	GREB1	Q4ZG55	1949 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZBED9	Q6R2W3	1325 aa		7.01	□□□□□ -1.29
KPNB1-209	ENST00000580158	DOCK5	Q9H7D0	1870 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	SRRM3	A6NNA2	597 aa	Predicted RBP	7	□□□□□ -1.29
KPNB1-209	ENST00000580158	HIDE1	A8MVS5	230 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	GOLIM4	O00461	696 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	CHRNA1	P02708	482 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	SRF	P11831	508 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	HOXD8	P13378	290 aa	Predicted RBP	7	□□□□□ -1.29
KPNB1-209	ENST00000580158	HOXC8	P31273	242 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	PLCB3	Q01970	1234 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	APOBR	Q0VD83	1088 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	SMC1A	Q14683	1233 aa	Known RBP	7	□□□□□ -1.29
KPNB1-209	ENST00000580158	LPIN1	Q14693	890 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	CCDC96	Q2M329	555 aa		7	□□□□□ -1.29

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