RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CWH43Q9H720 699 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 DISC1Q9NRI5 854 aa20.22■□□□□ 0.83
MKS1-209ENST00000580127 GLP2RO95838 553 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 TECP42680 631 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 CLCN3P51790 818 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 APOBRQ0VD83 1088 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 BLOC1S2Q6QNY1 142 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 RNF169Q8NCN4 708 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 RSPH1Q8WYR4 309 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 TCF25Q9BQ70 676 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 PCDHGC5Q9Y5F6 944 aa20.21■□□□□ 0.83
MKS1-209ENST00000580127 FSCN2O14926 492 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 GAS7O60861 476 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 OATP04181 439 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 PSMA5P28066 241 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 ALDH7A1P49419 539 aaKnown RBP20.2■□□□□ 0.82
MKS1-209ENST00000580127 JAK3P52333 1124 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 PTPN5P54829 565 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 PLPP4Q5VZY2 271 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 CES5AQ6NT32 575 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 ANKRD54Q6NXT1 300 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 ZBTB33Q86T24 672 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 FBXL6Q8N531 539 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 SUSD6Q92537 303 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 BRF1Q92994 677 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 JAKMIP1Q96N16 626 aaKnown RBP20.2■□□□□ 0.82
MKS1-209ENST00000580127 CASD1Q96PB1 797 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 MRPL9Q9BYD2 267 aaKnown RBP20.2■□□□□ 0.82
MKS1-209ENST00000580127 NR2E1Q9Y466 385 aa20.2■□□□□ 0.82
MKS1-209ENST00000580127 TECTAO75443 2155 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 SKIP12755 728 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 SIGLEC14Q08ET2 396 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 NLRP7Q8WX94 980 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 CASP10Q92851 521 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 TEKT3Q9BXF9 490 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 RNF26Q9BY78 433 aaPredicted RBP20.19■□□□□ 0.82
MKS1-209ENST00000580127 GCOM2Q9BZD3 368 aaPredicted RBP20.19■□□□□ 0.82
MKS1-209ENST00000580127 INO80BQ9C086 356 aaPredicted RBP20.19■□□□□ 0.82
MKS1-209ENST00000580127 ADAMTS10Q9H324 1103 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 CHST12Q9NRB3 414 aa20.19■□□□□ 0.82
MKS1-209ENST00000580127 ZNF318Q5VUA4 2279 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 A0A0U1RQF3 1178 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 SMC1AQ14683 1233 aaKnown RBP20.18■□□□□ 0.82
MKS1-209ENST00000580127 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 FBXL16Q8N461 479 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 LRRC71Q8N4P6 559 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 RDM1Q8NG50 284 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 NECTIN4Q96NY8 510 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 C5orf42Q9H799 3197 aa20.18■□□□□ 0.82
MKS1-209ENST00000580127 DARSP14868 501 aaKnown RBP20.17■□□□□ 0.82
MKS1-209ENST00000580127 NLRP5P59047 1200 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 PRKCEQ02156 737 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 ITIH3Q06033 890 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 LLGL2Q6P1M3 1020 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 MRPL43Q8N983 215 aaKnown RBP20.17■□□□□ 0.82
MKS1-209ENST00000580127 SLC26A6Q9BXS9 759 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 S1PR5Q9H228 398 aa20.17■□□□□ 0.82
MKS1-209ENST00000580127 MSH4O15457 936 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 GPC3P51654 580 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 XKR3Q5GH77 459 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 LRRC55Q6ZSA7 311 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 KCNB2Q92953 911 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 PHKBQ93100 1093 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 TMEM169Q96HH4 297 aa20.16■□□□□ 0.82
MKS1-209ENST00000580127 JPH2Q9BR39 696 aaPredicted RBP20.16■□□□□ 0.82
MKS1-209ENST00000580127 WDR81Q562E7 1941 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 CXCL14O95715 111 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 IFNAR1P17181 557 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 SFPQP23246 707 aaKnown RBP eCLIP20.15■□□□□ 0.82
MKS1-209ENST00000580127 CA8P35219 290 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 KCNC3Q14003 757 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 GIT2Q14161 759 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 PTPN21Q16825 1174 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 MIER3Q7Z3K6 550 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 EXOC8Q8IYI6 725 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 LINC01465Q8N7H1 131 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 VN1R2Q8NFZ6 395 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 SLC5A5Q92911 643 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 NIFKQ9BYG3 293 aaKnown RBP20.15■□□□□ 0.82
MKS1-209ENST00000580127 HCSTQ9UBK5 93 aa20.15■□□□□ 0.82
MKS1-209ENST00000580127 HIDE1A8MVS5 230 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 CHMP2AO43633 222 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 ZNF862O60290 1169 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 REC8O95072 547 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 CPA1P15085 419 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 HSPA4P34932 840 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 MTHFRP42898 656 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 NUBP1P53384 320 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 RBM10P98175 930 aaKnown RBP20.14■□□□□ 0.81
MKS1-209ENST00000580127 SYCE2Q6PIF2 218 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 HELQQ8TDG4 1101 aa20.14■□□□□ 0.81
MKS1-209ENST00000580127 LENG9Q96B70 501 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms