RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 VPS52Q8N1B4 723 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 RNF169Q8NCN4 708 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 BCL7CQ8WUZ0 217 aaPredicted RBP10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 ACSF2Q96CM8 615 aaPredicted RBP10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 TBC1D17Q9HA65 648 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 ERICH2A1L162 156 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 ZBTB42B2RXF5 422 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 ITGB3BPQ13352 177 aaPredicted RBP10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 WTAPQ15007 396 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 PLPPR4Q7Z2D5 763 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 GPR149Q86SP6 731 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 CABP7Q86V35 215 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 SUMF1Q8NBK3 374 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 HELQQ8TDG4 1101 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 MYL10Q9BUA6 226 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 DLGAP2Q9P1A6 1054 aa10.59□□□□□ -0.71
SMARCD2-208ENST00000580054 DDX39AO00148 427 aaKnown RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 HOXA2O43364 376 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 GPR32O75388 356 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 C22orf31O95567 290 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 CCNE2O96020 404 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 CYP21A2P08686 494 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 RFX1P22670 979 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 CRYBB1P53674 252 aaPredicted RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 BCAR1P56945 870 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 ST3GAL2Q16842 350 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 ODR4Q5SWX8 454 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 RALYLQ86SE5 291 aaKnown RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 CCDC60Q8IWA6 550 aaPredicted RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 TNPO1Q92973 898 aaKnown RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 TMEM169Q96HH4 297 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 ZNF668Q96K58 619 aaPredicted RBP10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 SDF4Q9BRK5 362 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 VN1R3Q9BXE9 311 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 KCNH7Q9NS40 1196 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 TAF6LQ9Y6J9 622 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 NFASCO94856 1347 aa10.58□□□□□ -0.72
SMARCD2-208ENST00000580054 COL1A2P08123 1366 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 ATRXP46100 2492 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 HBP1O60381 514 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 ZC3H11AO75152 810 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 LRRN2O75325 713 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 PLEKHA8P1O95397 391 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 CTSAP10619 480 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 GLULP15104 373 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 ATXN1P54253 815 aaKnown RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 TBC1D8BQ0IIM8 1120 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 SART3Q15020 963 aaKnown RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 PTPN14Q15678 1187 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 LETM2Q2VYF4 491 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 ZC3H14Q6PJT7 736 aaKnown RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 CATIPQ7Z7H3 387 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 MAML2Q8IZL2 1156 aaPredicted RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 ST13P5Q8NFI4 369 aaPredicted RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 FOXQ1Q9C009 403 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 PSTPIP2Q9H939 334 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 IGSF9Q9P2J2 1179 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 WNT16Q9UBV4 365 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 RALYQ9UKM9 306 aaKnown RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 PCDHA6Q9UN73 950 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 PCDHA8Q9Y5H6 950 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 IRAK3Q9Y616 596 aa10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 U3KPZ7 1027 aaPredicted RBP10.57□□□□□ -0.72
SMARCD2-208ENST00000580054 IGKV6D-21A0A0A0MT36 114 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 SPDYE3A6NKU9 549 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 E7EWF7 191 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 BACH1O14867 736 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 B4GALT3O60512 393 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 ATG7O95352 703 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 GSPT1P15170 499 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 ATP4AP20648 1035 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 FGFR4P22455 802 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 ALDH7A1P49419 539 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 CLCN3P51790 818 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 PTH1RQ03431 593 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 TRMT1LQ7Z2T5 733 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 C1orf210Q8IVY1 113 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 CMTR1Q8N1G2 835 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 NCOA7Q8NI08 942 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 GPR152Q8TDT2 470 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 MYADMQ96S97 322 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 AGO4Q9HCK5 861 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 MTCL1Q9Y4B5 1905 aaKnown RBP10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 FAM208BQ5VWN6 2430 aa10.56□□□□□ -0.72
SMARCD2-208ENST00000580054 DCDC2BA2VCK2 349 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms