RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 ZNF862O60290 1169 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 FGF18O76093 207 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 EOMESO95936 686 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 SKIP12755 728 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 DARSP14868 501 aaKnown RBP15.41■□□□□ 0.06
GGA3-208ENST00000579743 SFPQP23246 707 aaKnown RBP eCLIP15.41■□□□□ 0.06
GGA3-208ENST00000579743 GPC3P51654 580 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 ANAPC15P60006 121 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 PSMC5P62195 406 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 SMAD2Q15796 467 aaKnown RBP15.41■□□□□ 0.06
GGA3-208ENST00000579743 LETM2Q2VYF4 491 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 FAM102BQ5T8I3 360 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 LRRC43Q8N309 656 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 CDCA3Q99618 268 aaPredicted RBP15.41■□□□□ 0.06
GGA3-208ENST00000579743 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
GGA3-208ENST00000579743 NIFKQ9BYG3 293 aaKnown RBP15.41■□□□□ 0.06
GGA3-208ENST00000579743 ADAMTS10Q9H324 1103 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 TLR9Q9NR96 1032 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 CHST12Q9NRB3 414 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 TYW1Q9NV66 732 aaKnown RBP15.41■□□□□ 0.06
GGA3-208ENST00000579743 LZTS1Q9Y250 596 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 BDP1A6H8Y1 2624 aa15.41■□□□□ 0.06
GGA3-208ENST00000579743 BAG4O95429 457 aaKnown RBP15.4■□□□□ 0.06
GGA3-208ENST00000579743 TDP2O95551 362 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 NRIP1P48552 1158 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 GATMP50440 423 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 DSC3Q14574 896 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 INF2Q27J81 1249 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 NEK8Q86SG6 692 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 COLGALT1Q8NBJ5 622 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 FAM122AQ96E09 287 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 ZNF558Q96NG5 402 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 MRPL9Q9BYD2 267 aaKnown RBP15.4■□□□□ 0.06
GGA3-208ENST00000579743 ARIH1Q9Y4X5 557 aaPredicted RBP15.4■□□□□ 0.06
GGA3-208ENST00000579743 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 SPTBN5Q9NRC6 3674 aaKnown RBP15.4■□□□□ 0.06
GGA3-208ENST00000579743 STK36Q9NRP7 1315 aa15.4■□□□□ 0.06
GGA3-208ENST00000579743 MBTPS2O43462 519 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 DCXO43602 365 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 FGFR1P11362 822 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 LTBRP36941 435 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 QARSP47897 775 aaKnown RBP15.39■□□□□ 0.05
GGA3-208ENST00000579743 ZP2Q05996 745 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 CLUL1Q15846 466 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 UGCGQ16739 394 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 PPP4R3AQ6IN85 833 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 OTUD6AQ7L8S5 288 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 RBM23Q86U06 439 aaKnown RBP15.39■□□□□ 0.05
GGA3-208ENST00000579743 ZNF410Q86VK4 478 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 ECHDC2Q86YB7 292 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 LINC01465Q8N7H1 131 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 SLC7A3Q8WY07 619 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 MBOAT7Q96N66 472 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 PHF20Q9BVI0 1012 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 NGRNQ9NPE2 291 aaKnown RBP15.39■□□□□ 0.05
GGA3-208ENST00000579743 CD320Q9NPF0 282 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 PPP4R2Q9NY27 417 aa15.39■□□□□ 0.05
GGA3-208ENST00000579743 MYO7AQ13402 2215 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 A0A0U1RQF3 1178 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 PRR33A8MZF0 331 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 M0R2N6 131 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 TBX3O15119 743 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 CCNT1O60563 726 aaKnown RBP15.38■□□□□ 0.05
GGA3-208ENST00000579743 PFKFB2O60825 505 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 P4HBP07237 508 aaKnown RBP15.38■□□□□ 0.05
GGA3-208ENST00000579743 DNAJB1P25685 340 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 ALDH7A1P49419 539 aaKnown RBP15.38■□□□□ 0.05
GGA3-208ENST00000579743 PLCB3Q01970 1234 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 CAMK1Q14012 370 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 TARBP2Q15633 366 aaKnown RBP15.38■□□□□ 0.05
GGA3-208ENST00000579743 ERICH6BQ5W0A0 696 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 SLFN12Q8IYM2 578 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 TMEM87AQ8NBN3 555 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 MRPS27Q92552 414 aaKnown RBP15.38■□□□□ 0.05
GGA3-208ENST00000579743 ENTPD7Q9NQZ7 604 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 SPG21Q9NZD8 308 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 SUCLA2Q9P2R7 463 aaPredicted RBP15.38■□□□□ 0.05
GGA3-208ENST00000579743 KCNJ14Q9UNX9 436 aa15.38■□□□□ 0.05
GGA3-208ENST00000579743 TBX10O75333 385 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 MAFO75444 373 aaPredicted RBP15.37■□□□□ 0.05
GGA3-208ENST00000579743 GTF2F1P35269 517 aaKnown RBP eCLIP15.37■□□□□ 0.05
GGA3-208ENST00000579743 IRS1P35568 1242 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 RAB27AP51159 221 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 SCRN1Q12765 414 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 COASYQ13057 564 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 PPP2R5CQ13362 524 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 TRIM29Q14134 588 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 TWF2Q6IBS0 349 aaKnown RBP15.37■□□□□ 0.05
GGA3-208ENST00000579743 KCNT2Q6UVM3 1135 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 RHPN2Q8IUC4 686 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 GJA10Q969M2 543 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 ZNF668Q96K58 619 aaPredicted RBP15.37■□□□□ 0.05
GGA3-208ENST00000579743 AIFM3Q96NN9 605 aa15.37■□□□□ 0.05
GGA3-208ENST00000579743 ORC3Q9UBD5 711 aaPredicted RBP15.37■□□□□ 0.05
GGA3-208ENST00000579743 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
GGA3-208ENST00000579743 LINC01565O15544 149 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms