RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MBTPS2O43462 519 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CCNT1O60563 726 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FGF18O76093 207 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LAG3P18627 525 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CYP3A7P24462 503 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CA8P35219 290 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DNM2P50570 870 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DRP2Q13474 957 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DSC3Q14574 896 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 COL19A1Q14993 1142 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NPY5RQ15761 445 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 XKR3Q5GH77 459 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PLPP4Q5VZY2 271 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PLA2G4FQ68DD2 849 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 RHPN2Q8IUC4 686 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ETNPPLQ8TBG4 499 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PHF20Q9BVI0 1012 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 GCOM2Q9BZD3 368 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ELAC1Q9H777 363 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TLE6Q9H808 572 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TLR9Q9NR96 1032 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 GJB4Q9NTQ9 266 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CD207Q9UJ71 328 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TPCN1Q9ULQ1 816 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 BARX2Q9UMQ3 279 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 HCN4Q9Y3Q4 1203 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ATG2AQ2TAZ0 1938 aa10.35□□□□□ -0.75
CDK5RAP3-211ENST00000578996 STK36Q9NRP7 1315 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 A0A087WZ62 844 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PI4K2BG5E9Z4 385 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PFKFB2O60825 505 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 DARSP14868 501 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PBX3P40426 434 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FOSBP53539 338 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 AK2P54819 239 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PSMC5P62195 406 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ZP2Q05996 745 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ADAM15Q13444 863 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SMAD4Q13485 552 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SMAD2Q15796 467 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CSPP1Q1MSJ5 1256 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LONRF3Q496Y0 759 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 MOXD1Q6UVY6 613 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FAM43BQ6ZT52 329 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ECHDC2Q86YB7 292 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ADHFE1Q8IWW8 467 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 HELQQ8TDG4 1101 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 NLRP4Q96MN2 994 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CASD1Q96PB1 797 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 FDXACB1Q9BRP7 624 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 TMEM117Q9H0C3 514 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 CWH43Q9H720 699 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ENTPD7Q9NQZ7 604 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 BMP2KQ9NSY1 1161 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PPP4R2Q9NY27 417 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 SUCLA2Q9P2R7 463 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 ORC3Q9UBD5 711 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 BDP1A6H8Y1 2624 aa10.34□□□□□ -0.75
CDK5RAP3-211ENST00000578996 EVPLQ92817 2033 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EML1O00423 815 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GPR37L1O60883 481 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ALADP13716 330 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SFPQP23246 707 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ERVFC1P60507 584 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FAM189BP81408 668 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 UBE3AQ05086 875 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ANKRD1Q15327 319 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TWF2Q6IBS0 349 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NCAPH2Q6IBW4 605 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 B3GNT9Q6UX72 402 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LRRC55Q6ZSA7 311 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 POTEDQ86YR6 584 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 KSR1Q8IVT5 923 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EFHBQ8N7U6 833 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NECAB1Q8N987 351 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 WASF1Q92558 559 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZNF558Q96NG5 402 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 POP1Q99575 1024 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TCF25Q9BQ70 676 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 BRMS1Q9HCU9 246 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 C11orf16Q9NQ32 467 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DACT1Q9NYF0 836 aa10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PUF60Q9UHX1 559 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PIN4Q9Y237 131 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MYH9P35579 1960 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PLXNA4Q9HCM2 1894 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DCXO43602 365 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DKC1O60832 514 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms