RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 GPC3P51654 580 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 CDC42EP1Q00587 391 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
IFT20-208ENST00000578985 PLEKHG4Q58EX7 1191 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 PADI6Q6TGC4 694 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 OTOP2Q7RTS6 562 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
IFT20-208ENST00000578985 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 SEPT8Q92599 483 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 SYMPKQ92797 1274 aaKnown RBP17.12■□□□□ 0.33
IFT20-208ENST00000578985 EPSTI1Q96J88 318 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 RNPC3Q96LT9 517 aaKnown RBP17.12■□□□□ 0.33
IFT20-208ENST00000578985 SCLT1Q96NL6 688 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
IFT20-208ENST00000578985 ADAMTS10Q9H324 1103 aa17.12■□□□□ 0.33
IFT20-208ENST00000578985 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
IFT20-208ENST00000578985 RBAK-RBAKDNI3L0D1 243 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 CUTAO60888 179 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 CYP11B2P19099 503 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 TXLNAP40222 546 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 TCTN1Q2MV58 587 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 DBF4BQ8NFT6 615 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 PRPF31Q8WWY3 499 aaKnown RBP17.11■□□□□ 0.33
IFT20-208ENST00000578985 NLRP7Q8WX94 980 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
IFT20-208ENST00000578985 OSMRQ99650 979 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 MICAL3Q7RTP6 2002 aa17.11■□□□□ 0.33
IFT20-208ENST00000578985 ASAP2O43150 1006 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
IFT20-208ENST00000578985 PLCG1P19174 1290 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 CD52P31358 61 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 ME1P48163 572 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 LAMTOR4Q0VGL1 99 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 KSR1Q8IVT5 923 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
IFT20-208ENST00000578985 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
IFT20-208ENST00000578985 POLR3FQ9H1D9 316 aaPredicted RBP17.1■□□□□ 0.33
IFT20-208ENST00000578985 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
IFT20-208ENST00000578985 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
IFT20-208ENST00000578985 MYH11P35749 1972 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 ABHD14A-ACY1A0A1B0GW23 586 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 ZBBXA8MT70 800 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 RPS6KA5O75582 802 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 BAIAP3O94812 1187 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 PLA2G4BP0C869 781 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 ARL2P36404 184 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 IKBKEQ14164 716 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
IFT20-208ENST00000578985 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
IFT20-208ENST00000578985 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 RASIP1Q5U651 963 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 RRAGBQ5VZM2 374 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 ZNF410Q86VK4 478 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 TMEM40Q8WWA1 233 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 APBB2Q92870 758 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 GCOM2Q9BZD3 368 aaPredicted RBP17.09■□□□□ 0.33
IFT20-208ENST00000578985 CXXC1Q9P0U4 656 aaPredicted RBP17.09■□□□□ 0.33
IFT20-208ENST00000578985 PADI3Q9ULW8 664 aa17.09■□□□□ 0.33
IFT20-208ENST00000578985 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
IFT20-208ENST00000578985 A0A087WZ62 844 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 EFCAB14O75071 495 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 DARSP14868 501 aaKnown RBP17.08■□□□□ 0.32
IFT20-208ENST00000578985 EIF4BP23588 611 aaKnown RBP17.08■□□□□ 0.32
IFT20-208ENST00000578985 PAK2Q13177 524 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 SHC4Q6S5L8 630 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 SYT2Q8N9I0 419 aaPredicted RBP17.08■□□□□ 0.32
IFT20-208ENST00000578985 ASAP3Q8TDY4 903 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 RAD54LQ92698 747 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 FDXACB1Q9BRP7 624 aaPredicted RBP17.08■□□□□ 0.32
IFT20-208ENST00000578985 RUSC1Q9BVN2 902 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.32
IFT20-208ENST00000578985 ERVK-5Q9HDB9 667 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 GPRC5CQ9NQ84 441 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.32
IFT20-208ENST00000578985 GPR182O15218 404 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 GLRA2P23416 452 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 NFX1Q12986 1120 aaKnown RBP17.07■□□□□ 0.32
IFT20-208ENST00000578985 TFDP1Q14186 410 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 RNF149Q8NC42 400 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms