RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ANKEF1Q9NU02 776 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 PPME1Q9Y570 386 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 PCDHB6Q9Y5E3 794 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 STK24Q9Y6E0 443 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 LCHNA4D1U4 455 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 LINC01553A4QN01 128 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 ARHGEF35A5YM69 484 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 K7ELQ4 463 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 RFXAPO00287 272 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 LAD1O00515 517 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 ASAP2O43150 1006 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 STBD1O95210 358 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 DARSP14868 501 aaKnown RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 FGFR4P22455 802 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 SFPQP23246 707 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 TOB1P50616 345 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 GPC3P51654 580 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 SPIRE1Q08AE8 756 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 LAMTOR4Q0VGL1 99 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 DRP2Q13474 957 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 MXD4Q14582 209 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 EMC2Q15006 297 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM132AQ24JP5 1023 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 FAM102BQ5T8I3 360 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 KRT79Q5XKE5 535 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 HAUS3Q68CZ6 603 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 MAEAQ7L5Y9 396 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 BRAPQ7Z569 592 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 RTN4RL1Q86UN2 441 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 FERMT3Q86UX7 667 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 CATSPER3Q86XQ3 398 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 NPAS4Q8IUM7 802 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 KSR1Q8IVT5 923 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 ABI1Q8IZP0 508 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 RNF149Q8NC42 400 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 FBXO22Q8NEZ5 403 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 RASSF8Q8NHQ8 419 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 CDK5RAP3Q96JB5 506 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 MTRQ99707 1265 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 POLR3CQ9BUI4 534 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 ERVK-5Q9HDB9 667 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 TUFT1Q9NNX1 390 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 RGS18Q9NS28 235 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 C1orf112Q9NSG2 853 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 DACT1Q9NYF0 836 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
TRAF4-213ENST00000578917 DNM3Q9UQ16 869 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 COL4A3BPQ9Y5P4 624 aa7.3□□□□□ -1.24
TRAF4-213ENST00000578917 IGKV6-21A0A0C4DH24 114 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 VWA3AA6NCI4 1184 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 USO1O60763 962 aaKnown RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 MED24O75448 989 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 DGAT1O75907 488 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 ERLIN2O94905 339 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 LYPLA2O95372 231 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 RPA1P27694 616 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 PHKA2P46019 1235 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 SARSP49591 514 aaKnown RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 FXR2P51116 673 aaKnown RBP eCLIP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 ERVK-21P61565 698 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 HTRA4P83105 476 aaPredicted RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 MKRN4PQ13434 485 aaPredicted RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 CUL4AQ13619 759 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 PAN2Q504Q3 1202 aaKnown RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 TWF2Q6IBS0 349 aaKnown RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 POTEGQ6S5H5 508 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 ZNF410Q86VK4 478 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 FAM228AQ86W67 206 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM192Q8IY95 271 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 SPRYD3Q8NCJ5 442 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 INTS4Q96HW7 963 aaKnown RBP7.29□□□□□ -1.24
TRAF4-213ENST00000578917 SAMD11Q96NU1 681 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 C17orf80Q9BSJ5 609 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 TMX1Q9H3N1 280 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 CHST12Q9NRB3 414 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 LTBP2Q14767 1821 aa7.29□□□□□ -1.24
TRAF4-213ENST00000578917 CUL9Q8IWT3 2517 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 LRRIQ4A6NIV6 560 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 TBKBP1A7MCY6 615 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 INO80B-WBP1J3KQ70 363 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 HOXA2O43364 376 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 DGKIO75912 1065 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 BMP15O95972 392 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 SPATA31C1P0DKV0 1188 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 SKIP12755 728 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 LIG1P18858 919 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 SYT1P21579 422 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 CDC25AP30304 524 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 CTNNB1P35222 781 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 BMPR1AP36894 532 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 PRPHP41219 470 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 UBA7P41226 1012 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 RARRES1P49788 294 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms