RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MIER3Q7Z3K6 550 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 FBXL16Q8N461 479 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 EFHBQ8N7U6 833 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 SCLT1Q96NL6 688 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 CASD1Q96PB1 797 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 TLR9Q9NR96 1032 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 GJB4Q9NTQ9 266 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 TMEM161AQ9NX61 479 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 PRKAG3Q9UGI9 489 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
GGA3-207ENST00000578896 PCDHA4Q9UN74 947 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 CEP131Q9UPN4 1083 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 CACNA1HO95180 2353 aa10.08□□□□□ -0.8
GGA3-207ENST00000578896 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 HIDE1A8MVS5 230 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 PRR33A8MZF0 331 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 NT5C1B-RDH14C9J2C7 533 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 CPLX1O14810 134 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 PSMD10O75832 226 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 REC8O95072 547 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 STBD1O95210 358 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 DARSP14868 501 aaKnown RBP10.07□□□□□ -0.8
GGA3-207ENST00000578896 ZSCAN20P17040 1043 aaPredicted RBP10.07□□□□□ -0.8
GGA3-207ENST00000578896 EIF4BP23588 611 aaKnown RBP10.07□□□□□ -0.8
GGA3-207ENST00000578896 TMOD1P28289 359 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 USP11P51784 963 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 TARBP2Q15633 366 aaKnown RBP10.07□□□□□ -0.8
GGA3-207ENST00000578896 NPY5RQ15761 445 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 INF2Q27J81 1249 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 CLLU1OSQ5K130 101 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 ODR4Q5SWX8 454 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 ECHDC2Q86YB7 292 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 BLIDQ8IZY5 108 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 NLRP7Q8WX94 980 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 PPP2R3CQ969Q6 453 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 RPGRIP1Q96KN7 1286 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 FAM167AQ96KS9 214 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 RIT2Q99578 217 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 TMEM117Q9H0C3 514 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 CDH22Q9UJ99 828 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 USP15Q9Y4E8 981 aaPredicted RBP10.07□□□□□ -0.8
GGA3-207ENST00000578896 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
GGA3-207ENST00000578896 A0A087WZ62 844 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 M0R2N6 131 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 EML1O00423 815 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 FSCN2O14926 492 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 SLC37A4O43826 429 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 EYA4O95677 639 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 ATF7P17544 494 aaPredicted RBP10.06□□□□□ -0.8
GGA3-207ENST00000578896 SP100P23497 879 aaPredicted RBP10.06□□□□□ -0.8
GGA3-207ENST00000578896 JAK3P52333 1124 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 DUSP6Q16828 381 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 LETM2Q2VYF4 491 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 Q4G0T1 1027 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 PLA2G4FQ68DD2 849 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 KCNT2Q6UVM3 1135 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 HFE2Q6ZVN8 426 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
GGA3-207ENST00000578896 SMRP1Q8NCR6 262 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 LPPQ93052 612 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 CEP89Q96ST8 783 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 FDXACB1Q9BRP7 624 aaPredicted RBP10.06□□□□□ -0.8
GGA3-207ENST00000578896 ELAC1Q9H777 363 aaKnown RBP10.06□□□□□ -0.8
GGA3-207ENST00000578896 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
GGA3-207ENST00000578896 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
GGA3-207ENST00000578896 MEIS3P2A8K0S8 358 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 DEXIO95424 95 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 LAG3P18627 525 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 SFNP31947 248 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 CA8P35219 290 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 TECP42680 631 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 NPEPPSP55786 919 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 UBE3AQ05086 875 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 SCRN1Q12765 414 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 COASYQ13057 564 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 NONOQ15233 471 aaKnown RBP eCLIP10.05□□□□□ -0.8
GGA3-207ENST00000578896 XKR3Q5GH77 459 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 EARS2Q5JPH6 523 aaKnown RBP10.05□□□□□ -0.8
GGA3-207ENST00000578896 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 B3GNT9Q6UX72 402 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 ZNF598Q86UK7 904 aaKnown RBP10.05□□□□□ -0.8
GGA3-207ENST00000578896 RHPN2Q8IUC4 686 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 ABI1Q8IZP0 508 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 ETNPPLQ8TBG4 499 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
GGA3-207ENST00000578896 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
GGA3-207ENST00000578896 ZNF558Q96NG5 402 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 TCF25Q9BQ70 676 aa10.05□□□□□ -0.8
GGA3-207ENST00000578896 ENTPD7Q9NQZ7 604 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms