RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 LETM2Q2VYF4 491 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 VARS2Q5ST30 1063 aaKnown RBP16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 RSAD2Q8WXG1 361 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 DLGAP2Q9P1A6 1054 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 UBIAD1Q9Y5Z9 338 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 IRAK3Q9Y616 596 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 PKD1L2Q7Z442 2459 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 MAFGO15525 162 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 BCAR1P56945 870 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 ACTR2P61160 394 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 CLLU1OSQ5K130 101 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 PPFIBP1Q86W92 1011 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 RILPL2Q969X0 211 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 CHAMP1Q96JM3 812 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 JADE2Q9NQC1 790 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
PPP4R1-206ENST00000577779 ZFYVE26Q68DK2 2539 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 PRR5-ARHGAP8B1AHC4 643 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 CTSAP10619 480 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 SRFP11831 508 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 GBP2P32456 591 aaPredicted RBP16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 SLC26A2P50443 739 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 POLGP54098 1239 aaPredicted RBP16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 ARHGAP8P85298 464 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 LMNB2Q03252 620 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 PHLDB3Q6NSJ2 640 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 HELQQ8TDG4 1101 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 MRPL9Q9BYD2 267 aaKnown RBP16.11■□□□□ 0.17
PPP4R1-206ENST00000577779 POTEMA6NI47 508 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 HBP1O60381 514 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 N4BP1O75113 896 aaKnown RBP16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 SDSP20132 328 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 C15orf39Q6ZRI6 1047 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 SLC44A3Q8N4M1 653 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 GPR152Q8TDT2 470 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 RTKNQ9BST9 563 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 ARHGEF3Q9NR81 526 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 PCDHB15Q9Y5E8 787 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 FASNP49327 2511 aaKnown RBP16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 ASPMQ8IZT6 3477 aa16.1■□□□□ 0.17
PPP4R1-206ENST00000577779 SPTLC1O15269 473 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 ZC3H11AO75152 810 aaKnown RBP eCLIP16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 GPR32O75388 356 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 VTNP04004 478 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 ADRB1P08588 477 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 DDX53Q86TM3 631 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 TMEM173Q86WV6 379 aaPredicted RBP16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 PSTPIP2Q9H939 334 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 COL1A2P08123 1366 aa16.09■□□□□ 0.17
PPP4R1-206ENST00000577779 SPDYE3A6NKU9 549 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 BACH1O14867 736 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 KLRC2P26717 231 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 TROAPQ12815 778 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 PTPN14Q15678 1187 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 ZNF528Q3MIS6 628 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 ZNF484Q5JVG2 852 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 MAML2Q8IZL2 1156 aaPredicted RBP16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 METTL13Q8N6R0 699 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 PJA1Q8NG27 643 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 STAMQ92783 540 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 BORCS6Q96GS4 357 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 DSCC1Q9BVC3 393 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 EMILIN2Q9BXX0 1053 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 FOXQ1Q9C009 403 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 RALYQ9UKM9 306 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 USP18Q9UMW8 372 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 SSUH2Q9Y2M2 353 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 NFASCO94856 1347 aa16.08■□□□□ 0.16
PPP4R1-206ENST00000577779 ERICH2A1L162 156 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 IFIT3O14879 490 aaKnown RBP16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 GLULP15104 373 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 CLCN4P51793 760 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 UBE2SQ16763 222 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 FAM160B1Q5W0V3 765 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 DCLRE1AQ6PJP8 1040 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 ATRIPQ8WXE1 791 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 NXPE3Q969Y0 559 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 IGSF21Q96ID5 467 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 EPS15L1Q9UBC2 864 aa16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 CNOT1A5YKK6 2376 aaKnown RBP16.07■□□□□ 0.16
PPP4R1-206ENST00000577779 MIA3Q5JRA6 1907 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 CARNS1A5YM72 827 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 ZBTB42B2RXF5 422 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 ATG7O95352 703 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 C22orf31O95567 290 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms