RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 UBA7P41226 1012 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 POU5F1BQ06416 359 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 ECM1Q16610 540 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 FAM109BQ6ICB4 259 aaPredicted RBP21.78■■□□□ 1.08
SCO1-202ENST00000577335 RHPN2Q8IUC4 686 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 HERC6Q8IVU3 1022 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 TMEM40Q8WWA1 233 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 PRPF31Q8WWY3 499 aaKnown RBP21.78■■□□□ 1.08
SCO1-202ENST00000577335 TMEM143Q96AN5 459 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 XPNPEP1Q9NQW7 623 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 MSRAQ9UJ68 235 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 PCDHA11Q9Y5I1 949 aa21.78■■□□□ 1.08
SCO1-202ENST00000577335 YEATS4O95619 227 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 EYA4O95677 639 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 CYP11B2P19099 503 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 PADI6Q6TGC4 694 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 CABP7Q86V35 215 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 CALML4Q96GE6 196 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 LRCH3Q96II8 777 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 CDK5RAP3Q96JB5 506 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 FBXO2Q9UK22 296 aaPredicted RBP21.77■■□□□ 1.08
SCO1-202ENST00000577335 ST3GAL5Q9UNP4 418 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 TET1Q8NFU7 2136 aa21.77■■□□□ 1.08
SCO1-202ENST00000577335 ENPP3O14638 875 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 USO1O60763 962 aaKnown RBP21.76■■□□□ 1.07
SCO1-202ENST00000577335 BRD1O95696 1058 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 ARL2P36404 184 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 CEBPZQ03701 1054 aaKnown RBP21.76■■□□□ 1.07
SCO1-202ENST00000577335 LAMTOR4Q0VGL1 99 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 NFX1Q12986 1120 aaKnown RBP21.76■■□□□ 1.07
SCO1-202ENST00000577335 PKP1Q13835 747 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 TFDP1Q14186 410 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 FAM228AQ86W67 206 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 KRI1Q8N9T8 703 aaKnown RBP21.76■■□□□ 1.07
SCO1-202ENST00000577335 LINC00301Q8NCQ3 95 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 PPP1R16BQ96T49 567 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 PBX4Q9BYU1 374 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 CCSER1Q9C0I3 900 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 TSPYL2Q9H2G4 693 aaPredicted RBP21.76■■□□□ 1.07
SCO1-202ENST00000577335 BHMT2Q9H2M3 363 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 RNF216Q9NWF9 866 aaPredicted RBP21.76■■□□□ 1.07
SCO1-202ENST00000577335 CFAP45Q9UL16 551 aa21.76■■□□□ 1.07
SCO1-202ENST00000577335 A0A087WWV3 80 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 A0A087WZ62 844 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.75■■□□□ 1.07
SCO1-202ENST00000577335 GRXCR1A8MXD5 290 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 PPP6R2O75170 966 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 GJB5O95377 273 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 SFPQP23246 707 aaKnown RBP eCLIP21.75■■□□□ 1.07
SCO1-202ENST00000577335 DNAJB2P25686 324 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 MARCKSP29966 332 aaPredicted RBP21.75■■□□□ 1.07
SCO1-202ENST00000577335 DEFB103AP81534 67 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 STK38Q15208 465 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 PCBP1Q15365 356 aaKnown RBP eCLIP21.75■■□□□ 1.07
SCO1-202ENST00000577335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.75■■□□□ 1.07
SCO1-202ENST00000577335 SRGAP1Q7Z6B7 1085 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 TOP1MTQ969P6 601 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 NLRP4Q96MN2 994 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 FDXACB1Q9BRP7 624 aaPredicted RBP21.75■■□□□ 1.07
SCO1-202ENST00000577335 C1orf112Q9NSG2 853 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 ATP6V1DQ9Y5K8 247 aa21.75■■□□□ 1.07
SCO1-202ENST00000577335 GRB10Q13322 594 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 TMEM119Q4V9L6 283 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 FOXD4L5Q5VV16 416 aaPredicted RBP21.74■■□□□ 1.07
SCO1-202ENST00000577335 FOXD4L4Q8WXT5 416 aaPredicted RBP21.74■■□□□ 1.07
SCO1-202ENST00000577335 TIFAQ96CG3 184 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 PNMA5Q96PV4 448 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 RAD9AQ99638 391 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 ZBED2Q9BTP6 218 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 NFKBIZQ9BYH8 718 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 CSRNP2Q9H175 543 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 TMX1Q9H3N1 280 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 IFT122Q9HBG6 1241 aa21.74■■□□□ 1.07
SCO1-202ENST00000577335 BMP2KQ9NSY1 1161 aaPredicted RBP21.74■■□□□ 1.07
SCO1-202ENST00000577335 E9PMD0 336 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 SPTLC2O15270 562 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 TXLNAP40222 546 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 PHKA2P46019 1235 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 GRIN1Q05586 938 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 ZRSR1Q15695 479 aaKnown RBP21.73■■□□□ 1.07
SCO1-202ENST00000577335 IFNLR1Q8IU57 520 aaPredicted RBP21.73■■□□□ 1.07
SCO1-202ENST00000577335 KSR1Q8IVT5 923 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 MYOCDQ8IZQ8 938 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 RNF149Q8NC42 400 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 TIPINQ9BVW5 301 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 POLR3FQ9H1D9 316 aaPredicted RBP21.73■■□□□ 1.07
SCO1-202ENST00000577335 CHST12Q9NRB3 414 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 RGS18Q9NS28 235 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 KCND2Q9NZV8 630 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 TFIP11Q9UBB9 837 aaKnown RBP21.73■■□□□ 1.07
SCO1-202ENST00000577335 EVPLQ92817 2033 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 LAMA3Q16787 3333 aa21.73■■□□□ 1.07
SCO1-202ENST00000577335 SIP14410 1827 aa21.72■■□□□ 1.07
SCO1-202ENST00000577335 DENND3A2RUS2 1198 aa21.72■■□□□ 1.07
SCO1-202ENST00000577335 TLL1O43897 1013 aa21.72■■□□□ 1.07
SCO1-202ENST00000577335 SRGAP2CP0DJJ0 459 aa21.72■■□□□ 1.07
SCO1-202ENST00000577335 ZSCAN20P17040 1043 aaPredicted RBP21.72■■□□□ 1.07
SCO1-202ENST00000577335 RTN4RL1Q86UN2 441 aaPredicted RBP21.72■■□□□ 1.07
SCO1-202ENST00000577335 SYT2Q8N9I0 419 aaPredicted RBP21.72■■□□□ 1.07
SCO1-202ENST00000577335 KCNG4Q8TDN1 519 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms