RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LRRC55Q6ZSA7 311 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 PLA2G4DQ86XP0 818 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 TMEM105Q8N8V8 129 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 TMEM169Q96HH4 297 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 PGBD1Q96JS3 809 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 DACT1Q9NYF0 836 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 DBR1Q9UK59 544 aaKnown RBP15.15■□□□□ 0.02
COPS3-214ENST00000577246 MAFBQ9Y5Q3 323 aaPredicted RBP15.15■□□□□ 0.02
COPS3-214ENST00000577246 SMCO2A6NFE2 343 aa15.14■□□□□ 0.01
COPS3-214ENST00000577246 CLASP2O75122 1294 aaKnown RBP15.14■□□□□ 0.01
COPS3-214ENST00000577246 EIF4BP23588 611 aaKnown RBP15.14■□□□□ 0.01
COPS3-214ENST00000577246 PBX3P40426 434 aa15.14■□□□□ 0.01
COPS3-214ENST00000577246 NLRP11P59045 1033 aaKnown RBP15.14■□□□□ 0.01
COPS3-214ENST00000577246 RNF169Q8NCN4 708 aa15.14■□□□□ 0.01
COPS3-214ENST00000577246 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
COPS3-214ENST00000577246 SCLT1Q96NL6 688 aa15.14■□□□□ 0.01
COPS3-214ENST00000577246 ZNF577Q9BSK1 485 aa15.14■□□□□ 0.01
COPS3-214ENST00000577246 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
COPS3-214ENST00000577246 ZFHX2Q9C0A1 2572 aaPredicted RBP15.14■□□□□ 0.01
COPS3-214ENST00000577246 CACNA1HO95180 2353 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
COPS3-214ENST00000577246 CXCL14O95715 111 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
COPS3-214ENST00000577246 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
COPS3-214ENST00000577246 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 RAB11FIP4Q86YS3 637 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 CFAP54Q96N23 3096 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 CYP26B1Q9NR63 512 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 RNF19AQ9NV58 838 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 BARHL2Q9NY43 387 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 STK39Q9UEW8 545 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 CNTNAP5Q8WYK1 1306 aa15.13■□□□□ 0.01
COPS3-214ENST00000577246 FAM86B1E9PN63 330 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 DHX15O43143 795 aaKnown RBP15.12■□□□□ 0.01
COPS3-214ENST00000577246 CYP3A4P08684 503 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 FAM86B2P0C5J1 330 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 ATP4AP20648 1035 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 CLK2P49760 499 aaKnown RBP15.12■□□□□ 0.01
COPS3-214ENST00000577246 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
COPS3-214ENST00000577246 CLCN3P51790 818 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 BCAR1P56945 870 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 CDC42EP1Q00587 391 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 CLLU1OSQ5K130 101 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 EFCAB12Q6NXP0 572 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 CABP7Q86V35 215 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 LIMD1Q9UGP4 676 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 CDH22Q9UJ99 828 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 SAMM50Q9Y512 469 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 IRAK3Q9Y616 596 aa15.12■□□□□ 0.01
COPS3-214ENST00000577246 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 SLC27A2O14975 620 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 ASGR2P07307 311 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 SKIP12755 728 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 DARSP14868 501 aaKnown RBP15.11■□□□□ 0.01
COPS3-214ENST00000577246 ID4P47928 161 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 RTN1Q16799 776 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 TYW1BQ6NUM6 668 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 APOA5Q6Q788 366 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 OTOP3Q7RTS5 596 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
COPS3-214ENST00000577246 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 FLCNQ8NFG4 579 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 HELQQ8TDG4 1101 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 RTP3Q9BQQ7 232 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 ADAMTS10Q9H324 1103 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 CHST12Q9NRB3 414 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 GABBR1Q9UBS5 961 aa15.11■□□□□ 0.01
COPS3-214ENST00000577246 V9GY48 417 aaPredicted RBP15.11■□□□□ 0.01
COPS3-214ENST00000577246 IGLV3-22A0A075B6J6 115 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 WDR64B1ANS9 1081 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 ZBTB43O43298 467 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 CTSAP10619 480 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 CCDC149Q6ZUS6 474 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 DDX53Q86TM3 631 aaKnown RBP15.1■□□□□ 0.01
COPS3-214ENST00000577246 ZNF598Q86UK7 904 aaKnown RBP15.1■□□□□ 0.01
COPS3-214ENST00000577246 ADSSL1Q8N142 457 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
COPS3-214ENST00000577246 NLRP7Q8WX94 980 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 LRRC2Q9BYS8 371 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 ZBP1Q9H171 429 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 SFXN1Q9H9B4 322 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 FBXL21Q9UKT6 434 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 MYO15AQ9UKN7 3530 aa15.1■□□□□ 0.01
COPS3-214ENST00000577246 ZC3H11AO75152 810 aaKnown RBP eCLIP15.09■□□□□ 0.01
COPS3-214ENST00000577246 OATP04181 439 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 AOC1P19801 751 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 GPC3P51654 580 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 TDGQ13569 410 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 CREB3L3Q68CJ9 461 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms