RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FAM26DQ5JW98 314 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 FAM117BQ6P1L5 589 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 SHC4Q6S5L8 630 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 FAM228AQ86W67 206 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 TDHQ8IZJ6 230 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 DAW1Q8N136 415 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 RETREG2Q8NC44 543 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 DBF4BQ8NFT6 615 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 NEK9Q8TD19 979 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 RNPC3Q96LT9 517 aaKnown RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 PANK2Q9BZ23 570 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 ADAMTS10Q9H324 1103 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 TMX1Q9H3N1 280 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 DHX33Q9H6R0 707 aaKnown RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 MINDY3Q9H8M7 445 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 NRBP2Q9NSY0 501 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 BLOC1S4Q9NUP1 217 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 SUCLA2Q9P2R7 463 aaPredicted RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 NOC2LQ9Y3T9 749 aaKnown RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 SRPRBQ9Y5M8 271 aaKnown RBP8.81□□□□□ -1
CCDC40-215ENST00000576033 ATG2AQ2TAZ0 1938 aa8.81□□□□□ -1
CCDC40-215ENST00000576033 ADGRA3Q8IWK6 1321 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 A0A087WZ62 844 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 SPTLC2O15270 562 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 SSBP05455 408 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC40-215ENST00000576033 GLRA2P23416 452 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 GATMP50440 423 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 SLC12A3P55017 1021 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 WDR5P61964 334 aaKnown RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 PPIGQ13427 754 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC40-215ENST00000576033 CAPSQ13938 189 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 MCM6Q14566 821 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 NAALADL2Q58DX5 795 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 PLEKHG4Q58EX7 1191 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 HYIQ5T013 277 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 KRT79Q5XKE5 535 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 ARL6IP4Q66PJ3 421 aaKnown RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 HAUS3Q68CZ6 603 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 TAF2Q6P1X5 1199 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 PADI6Q6TGC4 694 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 PDILTQ8N807 584 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 ERMNQ8TAM6 284 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 GPT2Q8TD30 523 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 LEO1Q8WVC0 666 aaPredicted RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 NLRP7Q8WX94 980 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 STAMQ92783 540 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 MTRQ99707 1265 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 FDXACB1Q9BRP7 624 aaPredicted RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 SEZ6LQ9BYH1 1024 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 IFIH1Q9BYX4 1025 aaKnown RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 CELF4Q9BZC1 486 aaKnown RBP8.8□□□□□ -1
CCDC40-215ENST00000576033 GOLPH3LQ9H4A5 285 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 PCDHA7Q9UN72 937 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 CEP131Q9UPN4 1083 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 TRANK1O15050 2925 aa8.8□□□□□ -1
CCDC40-215ENST00000576033 NLRC5Q86WI3 1866 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 LCHNA4D1U4 455 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 ARHGEF35A5YM69 484 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 TTLL13PA6NNM8 815 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 SFI1A8K8P3 1242 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 B4GALT5O43286 388 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 MBD3O95983 291 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 SRGAP2CP0DJJ0 459 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 CASP1P29466 404 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 BMP8BP34820 402 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 LONP1P36776 959 aaKnown RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 LAMTOR4Q0VGL1 99 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 MAPK7Q13164 816 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 PDIA5Q14554 519 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 LONRF3Q496Y0 759 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 ARSHQ5FYA8 562 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 FAM102BQ5T8I3 360 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 RASIP1Q5U651 963 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 PSRC1Q6PGN9 363 aaPredicted RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 TSHZ1Q6ZSZ6 1077 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 RPAINQ86UA6 219 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 RTN4RL1Q86UN2 441 aaPredicted RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 CDR2LQ86X02 465 aaPredicted RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 GRAMD1CQ8IYS0 662 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 KRI1Q8N9T8 703 aaKnown RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 PRPF31Q8WWY3 499 aaKnown RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 CCDC43Q96MW1 224 aaKnown RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 ZNF396Q96N95 335 aaPredicted RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 SCLT1Q96NL6 688 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 IKZF4Q9H2S9 585 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 ATP6V0A4Q9HBG4 840 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 IFT122Q9HBG6 1241 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 ERVK-5Q9HDB9 667 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 ANKEF1Q9NU02 776 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 HCSTQ9UBK5 93 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 DBR1Q9UK59 544 aaKnown RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 PADI3Q9ULW8 664 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 YBX2Q9Y2T7 364 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms