RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SOX1O00570 391 aaPredicted RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 KIAA0355O15063 1070 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 GAS2O43903 313 aaKnown RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 CTSHP09668 335 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 LIG1P18858 919 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 ITGB8P26012 769 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 CYP2C18P33260 490 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 ARL2P36404 184 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 CCL23P55773 120 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 UBE2HP62256 183 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 RBL2Q08999 1139 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 MGAT3Q09327 533 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 TMEM62Q0P6H9 643 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 BFSP2Q13515 415 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 LONRF3Q496Y0 759 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 ZNF618Q5T7W0 954 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 FAM102BQ5T8I3 360 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 IER5Q5VY09 327 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 RSPH3Q86UC2 560 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 GPBP1Q86WP2 473 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 NME8Q8N427 588 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 ENGASEQ8NFI3 743 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 CAGE1Q8TC20 777 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 TCP11Q8WWU5 503 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 ZNF668Q96K58 619 aaPredicted RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 PPP1R16BQ96T49 567 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 PYM1Q9BRP8 204 aaKnown RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 CUEDC2Q9H467 287 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 LMBRD1Q9NUN5 540 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 SUCLA2Q9P2R7 463 aaPredicted RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 ZMYND8Q9ULU4 1186 aaPredicted RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 AKT3Q9Y243 479 aa9.51□□□□□ -0.89
NUP88-211ENST00000575976 TRIP12Q14669 1992 aaPredicted RBP9.51□□□□□ -0.89
NUP88-211ENST00000575976 ALPK3Q96L96 1907 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 KAT6AQ92794 2004 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 MYMKA6NI61 221 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 RSPH10B2B2RC85 870 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 ACTN4O43707 911 aaKnown RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 HIP1RO75146 1068 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 CAND2O75155 1236 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 GPR32O75388 356 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 ZNF202O95125 648 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 TIMP1P01033 207 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 CHRNA1P02708 482 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 IQCF3P0C7M6 154 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 SLFN14P0C7P3 912 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 RSPH10BP0C881 870 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 RAG1P15918 1043 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 SYN1P17600 705 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 GUCY2CP25092 1073 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 BMP8BP34820 402 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 DNM2P50570 870 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 GPC3P51654 580 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 MRPS6P82932 125 aaKnown RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 RAD51AP2Q09MP3 1159 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 MAPK7Q13164 816 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 SNW1Q13573 536 aaKnown RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 GIT2Q14161 759 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 FAM26DQ5JW98 314 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 LRRC8DQ7L1W4 858 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 DYMQ7RTS9 669 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 RHPN2Q8IUC4 686 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 KSR1Q8IVT5 923 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 CEP57L1Q8IYX8 460 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 FMR1NBQ8N0W7 255 aaPredicted RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 CCDC155Q8N6L0 562 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 MCPH1Q8NEM0 835 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 ASAP3Q8TDY4 903 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 PRPF31Q8WWY3 499 aaKnown RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 PSPC1Q8WXF1 523 aaKnown RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 MAP7D2Q96T17 732 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 CELF4Q9BZC1 486 aaKnown RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 OSBPL7Q9BZF2 842 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 POLR3FQ9H1D9 316 aaPredicted RBP9.5□□□□□ -0.89
NUP88-211ENST00000575976 WNT8AQ9H1J5 351 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 CDHR5Q9HBB8 845 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 KBTBD4Q9NVX7 518 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 KCND2Q9NZV8 630 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 USP25Q9UHP3 1055 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 TRPV2Q9Y5S1 764 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 CDY2AQ9Y6F7 541 aa9.5□□□□□ -0.89
NUP88-211ENST00000575976 A0A087WZ62 844 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
NUP88-211ENST00000575976 GOLGA6L22H0YM25 854 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 ASAP2O43150 1006 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 NR1I2O75469 434 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 RPLP2P05387 115 aaKnown RBP9.49□□□□□ -0.89
NUP88-211ENST00000575976 KRT18P05783 430 aaKnown RBP9.49□□□□□ -0.89
NUP88-211ENST00000575976 SELPP16109 830 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 GLRA2P23416 452 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 CASP1P29466 404 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 AFMP43652 599 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 NLRP11P59045 1033 aaKnown RBP9.49□□□□□ -0.89
NUP88-211ENST00000575976 FAM160A1Q05DH4 1040 aa9.49□□□□□ -0.89
NUP88-211ENST00000575976 LAMTOR4Q0VGL1 99 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms