RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 ECHDC2Q86YB7 292 aa23.52■■□□□ 1.36
SPNS3-203ENST00000575185 ABI1Q8IZP0 508 aa23.52■■□□□ 1.36
SPNS3-203ENST00000575185 BBXQ8WY36 941 aaPredicted RBP23.52■■□□□ 1.36
SPNS3-203ENST00000575185 TCEANC2Q96MN5 208 aa23.52■■□□□ 1.36
SPNS3-203ENST00000575185 SPG21Q9NZD8 308 aa23.52■■□□□ 1.36
SPNS3-203ENST00000575185 AKT3Q9Y243 479 aa23.52■■□□□ 1.36
SPNS3-203ENST00000575185 MAFBQ9Y5Q3 323 aaPredicted RBP23.52■■□□□ 1.36
SPNS3-203ENST00000575185 V9GY48 417 aaPredicted RBP23.52■■□□□ 1.36
SPNS3-203ENST00000575185 WDR87Q6ZQQ6 2873 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 CA8P35219 290 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 NLRP11P59045 1033 aaKnown RBP23.51■■□□□ 1.35
SPNS3-203ENST00000575185 KRT17Q04695 432 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 SMC1AQ14683 1233 aaKnown RBP23.51■■□□□ 1.35
SPNS3-203ENST00000575185 TPRNQ4KMQ1 711 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 KANK3Q6NY19 840 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 SLC39A11Q8N1S5 342 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 LRRC71Q8N4P6 559 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 FEZF2Q8TBJ5 459 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 ADAM7Q9H2U9 754 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 ADAMTS10Q9H324 1103 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 BARHL2Q9NY43 387 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 BRPF3Q9ULD4 1205 aa23.51■■□□□ 1.35
SPNS3-203ENST00000575185 NT5C1B-RDH14C9J2C7 533 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 PROB1E7EW31 1015 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 HOXA2O43364 376 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 CLASP2O75122 1294 aaKnown RBP23.5■■□□□ 1.35
SPNS3-203ENST00000575185 FGFR4P22455 802 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 RTN1Q16799 776 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 CES5AQ6NT32 575 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 UBALD2Q8IYN6 164 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 LINC01465Q8N7H1 131 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 C12orf76Q8N812 135 aaPredicted RBP23.5■■□□□ 1.35
SPNS3-203ENST00000575185 MRPL43Q8N983 215 aaKnown RBP23.5■■□□□ 1.35
SPNS3-203ENST00000575185 HELQQ8TDG4 1101 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 CRYGNQ8WXF5 182 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 ZNF577Q9BSK1 485 aa23.5■■□□□ 1.35
SPNS3-203ENST00000575185 RBM28Q9NW13 759 aaKnown RBP23.5■■□□□ 1.35
SPNS3-203ENST00000575185 PTPRZ1P23471 2315 aaPredicted RBP23.5■■□□□ 1.35
SPNS3-203ENST00000575185 RIF1Q5UIP0 2472 aaKnown RBP23.5■■□□□ 1.35
SPNS3-203ENST00000575185 METAP2P50579 478 aaKnown RBP eCLIP23.49■■□□□ 1.35
SPNS3-203ENST00000575185 NECTIN1Q15223 517 aa23.49■■□□□ 1.35
SPNS3-203ENST00000575185 RARS2Q5T160 578 aaKnown RBP23.49■■□□□ 1.35
SPNS3-203ENST00000575185 SYNE3Q6ZMZ3 975 aa23.49■■□□□ 1.35
SPNS3-203ENST00000575185 GABBR1Q9UBS5 961 aa23.49■■□□□ 1.35
SPNS3-203ENST00000575185 FAM186AA6NE01 2351 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 PRR23AA6NEV1 266 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 ZSCAN20P17040 1043 aaPredicted RBP23.48■■□□□ 1.35
SPNS3-203ENST00000575185 NUBP1P53384 320 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 ITIH3Q06033 890 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 EFCAB12Q6NXP0 572 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 SKAP1Q86WV1 359 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 AUTS2Q8WXX7 1259 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 NECTIN4Q96NY8 510 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 C2orf16Q68DN1 1984 aa23.48■■□□□ 1.35
SPNS3-203ENST00000575185 hCG_1984214I3L0E3 225 aa23.47■■□□□ 1.35
SPNS3-203ENST00000575185 ZBTB43O43298 467 aa23.47■■□□□ 1.35
SPNS3-203ENST00000575185 EIF4BP23588 611 aaKnown RBP23.47■■□□□ 1.35
SPNS3-203ENST00000575185 ZNF746Q6NUN9 644 aaPredicted RBP23.47■■□□□ 1.35
SPNS3-203ENST00000575185 ZNF598Q86UK7 904 aaKnown RBP23.47■■□□□ 1.35
SPNS3-203ENST00000575185 TMEM173Q86WV6 379 aaPredicted RBP23.47■■□□□ 1.35
SPNS3-203ENST00000575185 TEX2Q8IWB9 1127 aa23.47■■□□□ 1.35
SPNS3-203ENST00000575185 ZNF713Q8N859 430 aaPredicted RBP23.47■■□□□ 1.35
SPNS3-203ENST00000575185 MAP7D2Q96T17 732 aa23.47■■□□□ 1.35
SPNS3-203ENST00000575185 ESYT1Q9BSJ8 1104 aa23.47■■□□□ 1.35
SPNS3-203ENST00000575185 PSAPP07602 524 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 CYP3A4P08684 503 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 EPCAMP16422 314 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 CDC27P30260 824 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 NBL1P41271 181 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 BCAR1P56945 870 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 TDRD5Q8NAT2 981 aaKnown RBP23.46■■□□□ 1.35
SPNS3-203ENST00000575185 ANO2Q9NQ90 1003 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 FAM217BQ9NTX9 383 aaPredicted RBP23.46■■□□□ 1.35
SPNS3-203ENST00000575185 LIMD1Q9UGP4 676 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 CEP131Q9UPN4 1083 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 PCDHA10Q9Y5I2 948 aa23.46■■□□□ 1.35
SPNS3-203ENST00000575185 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.45■■□□□ 1.34
SPNS3-203ENST00000575185 GOLGA8AA7E2F4 631 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 GOLGA8BA8MQT2 603 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 MAGEB2O15479 319 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 ZNF862O60290 1169 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 CSDE1O75534 798 aaKnown RBP23.45■■□□□ 1.34
SPNS3-203ENST00000575185 MTHFRP42898 656 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 GPC3P51654 580 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 SMAP1Q8IYB5 467 aaPredicted RBP23.45■■□□□ 1.34
SPNS3-203ENST00000575185 ZBP1Q9H171 429 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 TBC1D22BQ9NU19 505 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 TCEAL9Q9UHQ7 104 aa23.45■■□□□ 1.34
SPNS3-203ENST00000575185 A0A0U1RQF3 1178 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 CDC45O75419 566 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 CXCL14O95715 111 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 DARSP14868 501 aaKnown RBP23.44■■□□□ 1.34
SPNS3-203ENST00000575185 SETQ01105 290 aaPredicted RBP23.44■■□□□ 1.34
SPNS3-203ENST00000575185 UGCGQ16739 394 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 PRR16Q569H4 304 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 ASTLQ6HA08 431 aaPredicted RBP23.44■■□□□ 1.34
SPNS3-203ENST00000575185 KIAA1841Q6NSI8 718 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 FRMD5Q7Z6J6 570 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 VPS52Q8N1B4 723 aa23.44■■□□□ 1.34
SPNS3-203ENST00000575185 BCL7CQ8WUZ0 217 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms