RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	LRRC41	Q15345	812 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	PRR16	Q569H4	304 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	EARS2	Q5JPH6	523 aa	Known RBP	11	□□□□□ -0.65
NXN-208	ENST00000575171	LCE2C	Q5TA81	110 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	C1orf53	Q5VUE5	145 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	NEK8	Q86SG6	692 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	DHX37	Q8IY37	1157 aa	Known RBP	11	□□□□□ -0.65
NXN-208	ENST00000575171	VTI1A	Q96AJ9	217 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	CDHR1	Q96JP9	859 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	PHACTR1	Q9C0D0	580 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171		Q9Y3F1	56 aa		11	□□□□□ -0.65
NXN-208	ENST00000575171	LRRC37A2	A6NM11	1700 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171		A0A1W2PNR3	127 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	KIF28P	B7ZC32	967 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	DDX39A	O00148	427 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	DNM1L	O00429	736 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	ZEB2	O60315	1214 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	CCNT1	O60563	726 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	MYL3	P08590	195 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	TGFB3	P10600	412 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	CPT1A	P50416	773 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	USP11	P51784	963 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	SP2	Q02086	613 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	ARHGAP1	Q07960	439 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	NEDD9	Q14511	834 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	OCLN	Q16625	522 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	FSCN1	Q16658	493 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	BRDT	Q58F21	947 aa	Predicted RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	CELF3	Q5SZQ8	465 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	CYFIP1	Q7L576	1253 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	AFG1L	Q8WV93	481 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	CRYGN	Q8WXF5	182 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	TNFRSF25	Q93038	417 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	GTPBP3	Q969Y2	492 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	FERMT2	Q96AC1	680 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	SPATA33	Q96N06	139 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	SDF4	Q9BRK5	362 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	ZNF577	Q9BSK1	485 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	UPF3A	Q9H1J1	476 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	FOXP1	Q9H334	677 aa	Predicted RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	AGO4	Q9HCK5	861 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	KCNH7	Q9NS40	1196 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	DDX25	Q9UHL0	483 aa	Known RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	GPC6	Q9Y625	555 aa	Predicted RBP	10.99	□□□□□ -0.65
NXN-208	ENST00000575171	LCT	P09848	1927 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	REV3L	O60673	3130 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	SMCHD1	A6NHR9	2005 aa		10.99	□□□□□ -0.65
NXN-208	ENST00000575171	IGLV3-22	A0A075B6J6	115 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	MEIS1	O00470	390 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	NOP56	O00567	594 aa	Known RBP	10.98	□□□□□ -0.65
NXN-208	ENST00000575171	MAFG	O15525	162 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	EDIL3	O43854	480 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	MARCH6	O60337	910 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	ATP9A	O75110	1047 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	THBS1	P07996	1170 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	KCNA2	P16389	499 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	PDC	P20941	246 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	CIITA	P33076	1130 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	LAMC2	Q13753	1193 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	KCNA10	Q16322	511 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	NIPA1	Q7RTP0	329 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	NLRP8	Q86W28	1048 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	ALDH16A1	Q8IZ83	802 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	GPR161	Q8N6U8	529 aa	Known RBP	10.98	□□□□□ -0.65
NXN-208	ENST00000575171	PCSK9	Q8NBP7	692 aa	Known RBP	10.98	□□□□□ -0.65
NXN-208	ENST00000575171	KLHDC9	Q8NEP7	349 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	NAP1L4	Q99733	375 aa	Known RBP	10.98	□□□□□ -0.65
NXN-208	ENST00000575171	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.98	□□□□□ -0.65
NXN-208	ENST00000575171	BCAS3	Q9H6U6	928 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	TCEAL9	Q9UHQ7	104 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	NOL7	Q9UMY1	257 aa	Known RBP	10.98	□□□□□ -0.65
NXN-208	ENST00000575171	MYO9B	Q13459	2157 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	CHD7	Q9P2D1	2997 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	PLXNA1	Q9UIW2	1896 aa		10.98	□□□□□ -0.65
NXN-208	ENST00000575171	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.97	□□□□□ -0.65
NXN-208	ENST00000575171	CTAGE5	O15320	804 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	SLC37A4	O43826	429 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	ASGR1	P07306	291 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	MMP3	P08254	477 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	SYT1	P21579	422 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	CST5	P28325	142 aa	Predicted RBP	10.97	□□□□□ -0.65
NXN-208	ENST00000575171	GMPR	P36959	345 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	CHMP4BP1	P59074	171 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171		Q4G0T1	1027 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	FIGNL1	Q6PIW4	674 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	METTL7B	Q6UX53	244 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	CXCL17	Q6UXB2	119 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	NOSTRIN	Q8IVI9	506 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.97	□□□□□ -0.65
NXN-208	ENST00000575171	SENP7	Q9BQF6	1050 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	JPH1	Q9HDC5	661 aa	Predicted RBP	10.97	□□□□□ -0.65
NXN-208	ENST00000575171	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.97	□□□□□ -0.65
NXN-208	ENST00000575171	MYH6	P13533	1939 aa		10.97	□□□□□ -0.65
NXN-208	ENST00000575171	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.96	□□□□□ -0.65
NXN-208	ENST00000575171		A0A1W2PQ45	241 aa	Predicted RBP	10.96	□□□□□ -0.65
NXN-208	ENST00000575171		A0A1W2PQY0	241 aa		10.96	□□□□□ -0.65
NXN-208	ENST00000575171	IPO5	O00410	1097 aa	Known RBP	10.96	□□□□□ -0.65
NXN-208	ENST00000575171	MSH4	O15457	936 aa		10.96	□□□□□ -0.65
NXN-208	ENST00000575171	GCFC2	P16383	781 aa	Known RBP	10.96	□□□□□ -0.65
NXN-208	ENST00000575171	CYP3A7	P24462	503 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms