RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 CDK5RAP3Q96JB5 506 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
CHD3-216ENST00000573936 MTRQ99707 1265 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
CHD3-216ENST00000573936 KIAA1024Q9UPX6 916 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 DNM3Q9UQ16 869 aa12.29□□□□□ -0.44
CHD3-216ENST00000573936 ARHGEF35A5YM69 484 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 ZBTB39O15060 712 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 SPTLC2O15270 562 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 ASAP2O43150 1006 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 PPP6R2O75170 966 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 BAIAP3O94812 1187 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 MARCKSP29966 332 aaPredicted RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 RARRES1P49788 294 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 CRYBB1P53674 252 aaPredicted RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 PKP1Q13835 747 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 IKBKEQ14164 716 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 GPNMBQ14956 572 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 HYIQ5T013 277 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 TSHZ1Q6ZSZ6 1077 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 CABP7Q86V35 215 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 LRRC71Q8N4P6 559 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 PIGOQ8TEQ8 1089 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 SEPT8Q92599 483 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 SH2D3AQ9BRG2 576 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 ATP6V0A4Q9HBG4 840 aa12.28□□□□□ -0.44
CHD3-216ENST00000573936 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 CXXC1Q9P0U4 656 aaPredicted RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 SUCLA2Q9P2R7 463 aaPredicted RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 TFIP11Q9UBB9 837 aaKnown RBP12.28□□□□□ -0.44
CHD3-216ENST00000573936 ABHD14A-ACY1A0A1B0GW23 586 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 PP2D1A8MPX8 630 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 GPR32O75388 356 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 EYA4O95677 639 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 VTNP04004 478 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 CDC25AP30304 524 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 TXLNAP40222 546 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 MBTPS1Q14703 1052 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 EMC2Q15006 297 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 ECM1Q16610 540 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 PLEKHG4Q58EX7 1191 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 FBXO47Q5MNV8 452 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 OTOP2Q7RTS6 562 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
CHD3-216ENST00000573936 MCPH1Q8NEM0 835 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 KCNG4Q8TDN1 519 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 PSPC1Q8WXF1 523 aaKnown RBP12.27□□□□□ -0.45
CHD3-216ENST00000573936 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
CHD3-216ENST00000573936 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
CHD3-216ENST00000573936 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.45
CHD3-216ENST00000573936 NCOR1O75376 2440 aa12.27□□□□□ -0.45
CHD3-216ENST00000573936 TRIP12Q14669 1992 aaPredicted RBP12.27□□□□□ -0.45
CHD3-216ENST00000573936 TANC1Q9C0D5 1861 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 ZBBXA8MT70 800 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 GPR182O15218 404 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 GHRP10912 638 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 KCNJ6P48051 423 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 NLRP11P59045 1033 aaKnown RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 MXD4Q14582 209 aaPredicted RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 LPIN1Q14693 890 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 ZRSR1Q15695 479 aaKnown RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 AAK1Q2M2I8 961 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 KIZQ2M2Z5 673 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 FOXD4L6Q3SYB3 417 aaPredicted RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 FOXD4L3Q6VB84 417 aaPredicted RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 ZNF410Q86VK4 478 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 RHPN2Q8IUC4 686 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 DBF4BQ8NFT6 615 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 RASSF8Q8NHQ8 419 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 PHOSPHO2Q8TCD6 241 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 VWCEQ96DN2 955 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 SCLT1Q96NL6 688 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 GCOM2Q9BZD3 368 aaPredicted RBP12.26□□□□□ -0.45
CHD3-216ENST00000573936 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 CSRNP2Q9H175 543 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 ADAMTS10Q9H324 1103 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 CCDC39Q9UFE4 941 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 GINS2Q9Y248 185 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 ZDHHC9Q9Y397 364 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 SLC4A7Q9Y6M7 1214 aa12.26□□□□□ -0.45
CHD3-216ENST00000573936 WDR81Q562E7 1941 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 SCN5AQ14524 2016 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 A0A087WWV3 80 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 USO1O60763 962 aaKnown RBP12.25□□□□□ -0.45
CHD3-216ENST00000573936 CUTAO60888 179 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 CYP11B2P19099 503 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
CHD3-216ENST00000573936 DDIT3P35638 169 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 GPC3P51654 580 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 KRT85P78386 507 aa12.25□□□□□ -0.45
CHD3-216ENST00000573936 DNM1Q05193 864 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms