RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NEMFO60524 1076 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 MAFO75444 373 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 CSDE1O75534 798 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 LINC00271P0C7V0 271 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 FGFR1P11362 822 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 BMP1P13497 986 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 DARSP14868 501 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 ATP2B1P20020 1258 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 POLGP54098 1239 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 NPEPPSP55786 919 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 CYP4A11Q02928 519 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 CTTNQ14247 550 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 EPHA7Q15375 998 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 CALCRLQ16602 461 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 TCEAL5Q5H9L2 206 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 FAM43BQ6ZT52 329 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 RNF169Q8NCN4 708 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 SLC7A3Q8WY07 619 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 DYDC2Q96IM9 177 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 C8orf76Q96K31 380 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 CEP170P1Q96L14 293 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 PLVAPQ9BX97 442 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 GCOM2Q9BZD3 368 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 NSUN3Q9H649 340 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 UBE2ZQ9H832 354 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 ALG13Q9NP73 1137 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 CYP26B1Q9NR63 512 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 RGL1Q9NZL6 768 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 SUCLA2Q9P2R7 463 aaPredicted RBP14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 VCANP13611 3396 aa14.23□□□□□ -0.13
NPLOC4-213ENST00000573519 XIRP2A4UGR9 3374 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 A0A087WZ62 844 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 KCNA5P22460 613 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 TXKP42681 527 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 CDC42EP1Q00587 391 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 DSC3Q14574 896 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 KSR1Q8IVT5 923 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 TPH2Q8IWU9 490 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 NECAB3Q96P71 396 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 CEP89Q96ST8 783 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 JPH2Q9BR39 696 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 FDXACB1Q9BRP7 624 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 LLPHQ9BRT6 129 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 UPF2Q9HAU5 1272 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 WRAP73Q9P2S5 460 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 PCDHA12Q9UN75 941 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 EVPLQ92817 2033 aa14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 PRRC2BQ5JSZ5 2229 aaKnown RBP14.22□□□□□ -0.13
NPLOC4-213ENST00000573519 IGKV6-21A0A0C4DH24 114 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 WNT7AO00755 349 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 YWHABP31946 246 aaKnown RBP14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 RABEP1Q15276 862 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 XKR9Q5GH70 373 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 OTUD6AQ7L8S5 288 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 KLHL23Q8NBE8 558 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 LMAN2LQ9H0V9 348 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 ELAC1Q9H777 363 aaKnown RBP14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 ZSWIM4Q9H7M6 989 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 TTC12Q9H892 705 aaPredicted RBP14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 PLAGL2Q9UPG8 496 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 PCDHB12Q9Y5F1 795 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.13
NPLOC4-213ENST00000573519 WDR81Q562E7 1941 aa14.21□□□□□ -0.14
NPLOC4-213ENST00000573519 TTC3P53804 2025 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 SFPQP23246 707 aaKnown RBP eCLIP14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 MCM7P33993 719 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 FAM189BP81408 668 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 HMGN5P82970 282 aaKnown RBP14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 SPIRE1Q08AE8 756 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 ZNF410Q86VK4 478 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 C4orf19Q8IY42 314 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 EXOC8Q8IYI6 725 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 ABI1Q8IZP0 508 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 P2RX5Q93086 422 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 TMEM143Q96AN5 459 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 EIF2AK1Q9BQI3 630 aaKnown RBP14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 INO80BQ9C086 356 aaPredicted RBP14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 IGFLR1Q9H665 355 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 AAASQ9NRG9 546 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 CLDND1Q9NY35 253 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 HCSTQ9UBK5 93 aa14.2□□□□□ -0.14
NPLOC4-213ENST00000573519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 H3BQ06 376 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 ZBTB39O15060 712 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 HOXA2O43364 376 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 SLITRK3O94933 977 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 ITGB1P05556 798 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 SRGAP2CP0DJJ0 459 aa14.19□□□□□ -0.14
NPLOC4-213ENST00000573519 RFC5P40937 340 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms