RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TRAPPC10P48553 1259 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 GPC3P51654 580 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 NPEPPSP55786 919 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 PSMC5P62195 406 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 RAB30Q15771 203 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 CALCRLQ16602 461 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 ECM1Q16610 540 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 XKR3Q5GH77 459 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 TTC38Q5R3I4 469 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 C4orf19Q8IY42 314 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 SLFN12Q8IYM2 578 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 LRRC15Q8TF66 581 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 MMTAG2Q9BU76 263 aaKnown RBP9.75□□□□□ -0.85
SMG6-210ENST00000572205 TMUB1Q9BVT8 246 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMG6-210ENST00000572205 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 TTC12Q9H892 705 aaPredicted RBP9.75□□□□□ -0.85
SMG6-210ENST00000572205 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
SMG6-210ENST00000572205 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
SMG6-210ENST00000572205 STXBP5LQ9Y2K9 1186 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
SMG6-210ENST00000572205 SAMM50Q9Y512 469 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 TTC28Q96AY4 2481 aa9.75□□□□□ -0.85
SMG6-210ENST00000572205 TDRD15B5MCY1 1934 aaKnown RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 LINC01553A4QN01 128 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 RPLP2P05387 115 aaKnown RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 OR52Z1P0C646 297 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 ACTN1P12814 892 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 TRIM29Q14134 588 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 CTTNQ14247 550 aaKnown RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 ZNF174Q15697 407 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 KIZQ2M2Z5 673 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 TMEM266Q2M3C6 531 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 MTERF2Q49AM1 385 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 NCAPH2Q6IBW4 605 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 NME8Q8N427 588 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 USP38Q8NB14 1042 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 MYLIPQ8WY64 445 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 APBB2Q92870 758 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 TOP1MTQ969P6 601 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 SNX21Q969T3 373 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 ZNF689Q96CS4 500 aaPredicted RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 OSMRQ99650 979 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 EIF2AK1Q9BQI3 630 aaKnown RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 MTIF3Q9H2K0 278 aaKnown RBP9.74□□□□□ -0.85
SMG6-210ENST00000572205 CYP26B1Q9NR63 512 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 RNF19AQ9NV58 838 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 PADI3Q9ULW8 664 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 CEP131Q9UPN4 1083 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 TCHHQ07283 1943 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 TRIP11Q15643 1979 aa9.74□□□□□ -0.85
SMG6-210ENST00000572205 MYO7AQ13402 2215 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 PP2D1A8MPX8 630 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 EFCAB14O75071 495 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 ATF7P17544 494 aaPredicted RBP9.73□□□□□ -0.85
SMG6-210ENST00000572205 YWHABP31946 246 aaKnown RBP9.73□□□□□ -0.85
SMG6-210ENST00000572205 RARRES1P49788 294 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
SMG6-210ENST00000572205 RESTQ13127 1097 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 IKBKEQ14164 716 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 EFCAB12Q6NXP0 572 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 TRMT1LQ7Z2T5 733 aaKnown RBP9.73□□□□□ -0.85
SMG6-210ENST00000572205 FAM184AQ8NB25 1140 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 SEPT8Q92599 483 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 MINDY3Q9H8M7 445 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
SMG6-210ENST00000572205 ANK1P16157 1881 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 A0A087WWV3 80 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 C9IYK1 514 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
SMG6-210ENST00000572205 ENPP3O14638 875 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 MAGEB2O15479 319 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 DARSP14868 501 aaKnown RBP9.72□□□□□ -0.85
SMG6-210ENST00000572205 TXKP42681 527 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 CRYBB1P53674 252 aaPredicted RBP9.72□□□□□ -0.85
SMG6-210ENST00000572205 GRIN1Q05586 938 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 EMC2Q15006 297 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 SAFBQ15424 915 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMG6-210ENST00000572205 IER5Q5VY09 327 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 POTEGQ6S5H5 508 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 KCNK18Q7Z418 384 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 CATSPER3Q86XQ3 398 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 KSR1Q8IVT5 923 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 CKAP2LQ8IYA6 745 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 MYOCDQ8IZQ8 938 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 POM121Q96HA1 1249 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
SMG6-210ENST00000572205 ZNF668Q96K58 619 aaPredicted RBP9.72□□□□□ -0.85
SMG6-210ENST00000572205 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
SMG6-210ENST00000572205 PRDM12Q9H4Q4 367 aa9.72□□□□□ -0.85
SMG6-210ENST00000572205 ZSWIM4Q9H7M6 989 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms