RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 GATMP50440 423 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 NPAS4Q8IUM7 802 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 KSR1Q8IVT5 923 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 ZSWIM4Q9H7M6 989 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 SUCLA2Q9P2R7 463 aaPredicted RBP16.28■□□□□ 0.2
LITAF-208ENST00000571627 DGKIO75912 1065 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 SLITRK3O94933 977 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 OR52Z1P0C646 297 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 DARSP14868 501 aaKnown RBP16.27■□□□□ 0.2
LITAF-208ENST00000571627 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
LITAF-208ENST00000571627 SARSP49591 514 aaKnown RBP16.27■□□□□ 0.2
LITAF-208ENST00000571627 DNM2P50570 870 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.2
LITAF-208ENST00000571627 CUL4AQ13619 759 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 BTG3Q14201 252 aaPredicted RBP16.27■□□□□ 0.2
LITAF-208ENST00000571627 PAN2Q504Q3 1202 aaKnown RBP16.27■□□□□ 0.2
LITAF-208ENST00000571627 EPC2Q52LR7 807 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 XKR9Q5GH70 373 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 ODR4Q5SWX8 454 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 RHPN2Q8IUC4 686 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 FIBCD1Q8N539 461 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 ZNF689Q96CS4 500 aaPredicted RBP16.27■□□□□ 0.2
LITAF-208ENST00000571627 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
LITAF-208ENST00000571627 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 A0A087WWV3 80 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 A0A087WZ62 844 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 C9IYK1 514 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 POU3F3P20264 500 aaPredicted RBP16.26■□□□□ 0.19
LITAF-208ENST00000571627 CTNNB1P35222 781 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 TECP42680 631 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
LITAF-208ENST00000571627 DSC3Q14574 896 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 SLC7A3Q8WY07 619 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 NLRP4Q96MN2 994 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 FDXACB1Q9BRP7 624 aaPredicted RBP16.26■□□□□ 0.19
LITAF-208ENST00000571627 DHX33Q9H6R0 707 aaKnown RBP16.26■□□□□ 0.19
LITAF-208ENST00000571627 RGS18Q9NS28 235 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 LRFN2Q9ULH4 789 aa16.26■□□□□ 0.19
LITAF-208ENST00000571627 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
LITAF-208ENST00000571627 MYO7AQ13402 2215 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 H3BQV1 296 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 STAG3L1P0CL83 205 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 RFC5P40937 340 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 ORC2Q13416 577 aaPredicted RBP16.25■□□□□ 0.19
LITAF-208ENST00000571627 EMC2Q15006 297 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 OTUD6AQ7L8S5 288 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 ZNF710Q8N1W2 664 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 NEK9Q8TD19 979 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 PIGOQ8TEQ8 1089 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 SNX21Q969T3 373 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 SAMD11Q96NU1 681 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 JPH2Q9BR39 696 aaPredicted RBP16.25■□□□□ 0.19
LITAF-208ENST00000571627 GCOM2Q9BZD3 368 aaPredicted RBP16.25■□□□□ 0.19
LITAF-208ENST00000571627 C1orf112Q9NSG2 853 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 MRPL42Q9Y6G3 142 aaKnown RBP16.25■□□□□ 0.19
LITAF-208ENST00000571627 BRWD1Q9NSI6 2320 aa16.25■□□□□ 0.19
LITAF-208ENST00000571627 VCANP13611 3396 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
LITAF-208ENST00000571627 LYPLA2O95372 231 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 SPATA31C1P0DKV0 1188 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 TRAPPC10P48553 1259 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 SKIV2LQ15477 1246 aaKnown RBP16.24■□□□□ 0.19
LITAF-208ENST00000571627 FAM102BQ5T8I3 360 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 PRPF31Q8WWY3 499 aaKnown RBP16.24■□□□□ 0.19
LITAF-208ENST00000571627 XPNPEP1Q9NQW7 623 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 PPME1Q9Y570 386 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 COL4A3BPQ9Y5P4 624 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 PLXNA4Q9HCM2 1894 aa16.24■□□□□ 0.19
LITAF-208ENST00000571627 XIRP2A4UGR9 3374 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 MED24O75448 989 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 SRGAP2CP0DJJ0 459 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 FGFR1P11362 822 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 GPM6BQ13491 265 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 LARP1BQ659C4 914 aaKnown RBP16.23■□□□□ 0.19
LITAF-208ENST00000571627 POTEGQ6S5H5 508 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 ZNF410Q86VK4 478 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 CATSPER3Q86XQ3 398 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 CMTR2Q8IYT2 770 aaKnown RBP16.23■□□□□ 0.19
LITAF-208ENST00000571627 PSPC1Q8WXF1 523 aaKnown RBP16.23■□□□□ 0.19
LITAF-208ENST00000571627 CLP1Q92989 425 aaKnown RBP16.23■□□□□ 0.19
LITAF-208ENST00000571627 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
LITAF-208ENST00000571627 CCDC43Q96MW1 224 aaKnown RBP16.23■□□□□ 0.19
LITAF-208ENST00000571627 MTRQ99707 1265 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 ANKEF1Q9NU02 776 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
LITAF-208ENST00000571627 TBKBP1A7MCY6 615 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 H3BNC9 293 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 CSPG5O95196 566 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 ZSCAN20P17040 1043 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms