RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 WRAP73Q9P2S5 460 aaPredicted RBP34.02■■■■□ 3.04
CTDNEP1-206ENST00000571409 MAFO75444 373 aaPredicted RBP34.01■■■■□ 3.03
CTDNEP1-206ENST00000571409 DARSP14868 501 aaKnown RBP34.01■■■■□ 3.03
CTDNEP1-206ENST00000571409 DNM2P50570 870 aa34.01■■■■□ 3.03
CTDNEP1-206ENST00000571409 GUCY1B3Q02153 619 aa34.01■■■■□ 3.03
CTDNEP1-206ENST00000571409 SPIRE1Q08AE8 756 aa34.01■■■■□ 3.03
CTDNEP1-206ENST00000571409 BMP1P13497 986 aa34■■■■□ 3.03
CTDNEP1-206ENST00000571409 CALCRLQ16602 461 aa34■■■■□ 3.03
CTDNEP1-206ENST00000571409 LXNQ9BS40 222 aa34■■■■□ 3.03
CTDNEP1-206ENST00000571409 PLVAPQ9BX97 442 aa34■■■■□ 3.03
CTDNEP1-206ENST00000571409 CYP26B1Q9NR63 512 aa34■■■■□ 3.03
CTDNEP1-206ENST00000571409 WNT7AO00755 349 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 GRM6O15303 877 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 ZSCAN20P17040 1043 aaPredicted RBP33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 NPEPPSP55786 919 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 CDC42EP1Q00587 391 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 SAFBQ15424 915 aaKnown RBP eCLIP33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 DYDC2Q96IM9 177 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 C8orf76Q96K31 380 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 JPH2Q9BR39 696 aaPredicted RBP33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 LMAN2LQ9H0V9 348 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 RGL1Q9NZL6 768 aa33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 SUCLA2Q9P2R7 463 aaPredicted RBP33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 FNDC1Q4ZHG4 1894 aaPredicted RBP33.99■■■■□ 3.03
CTDNEP1-206ENST00000571409 FGFR4P22455 802 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 RBM25P49756 843 aaKnown RBP33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 FAM189BP81408 668 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 FAM102BQ5T8I3 360 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 C4orf19Q8IY42 314 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 CEP170P1Q96L14 293 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 UHRF1Q96T88 793 aaPredicted RBP33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 GCOM2Q9BZD3 368 aaPredicted RBP33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 UBE2ZQ9H832 354 aaPredicted RBP33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 ATP6V0A4Q9HBG4 840 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 SH2B1Q9NRF2 756 aaPredicted RBP33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 TMEM161AQ9NX61 479 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 ATG2AQ2TAZ0 1938 aa33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 TCF20Q9UGU0 1960 aaKnown RBP33.98■■■■□ 3.03
CTDNEP1-206ENST00000571409 TBKBP1A7MCY6 615 aa33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 NEMFO60524 1076 aa33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 RHPN2Q8IUC4 686 aa33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 P2RX5Q93086 422 aa33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 NSUN3Q9H649 340 aaKnown RBP33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 ELAC1Q9H777 363 aaKnown RBP33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 PCDHA12Q9UN75 941 aa33.97■■■■□ 3.03
CTDNEP1-206ENST00000571409 A0A087WZ62 844 aa33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 CSDE1O75534 798 aaKnown RBP33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 CYP4A11Q02928 519 aa33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 CTTNQ14247 550 aaKnown RBP33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 TCEAL5Q5H9L2 206 aa33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 ZNF579Q8NAF0 562 aaKnown RBP33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 FDXACB1Q9BRP7 624 aaPredicted RBP33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 ZSWIM4Q9H7M6 989 aa33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 ALG13Q9NP73 1137 aaKnown RBP33.96■■■■□ 3.03
CTDNEP1-206ENST00000571409 FGFR1P11362 822 aa33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 YWHABP31946 246 aaKnown RBP33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 HMGN5P82970 282 aaKnown RBP33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 ZNF410Q86VK4 478 aa33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 SLC7A3Q8WY07 619 aa33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 TTC12Q9H892 705 aaPredicted RBP33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 PLAGL2Q9UPG8 496 aa33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 PPME1Q9Y570 386 aa33.95■■■■□ 3.03
CTDNEP1-206ENST00000571409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 TNFRSF10AO00220 468 aa33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 CSPG5O95196 566 aa33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 POLGP54098 1239 aaPredicted RBP33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 NAALADL2Q58DX5 795 aa33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 OTUD6AQ7L8S5 288 aa33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 EIF2AK1Q9BQI3 630 aaKnown RBP33.94■■■■□ 3.02
CTDNEP1-206ENST00000571409 ARID2Q68CP9 1835 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 ATP2B1P20020 1258 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 TXKP42681 527 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 SPOUT1Q5T280 376 aaKnown RBP33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 KSR1Q8IVT5 923 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 TPH2Q8IWU9 490 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 EXOC8Q8IYI6 725 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 KLHL23Q8NBE8 558 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 NLRP4Q96MN2 994 aa33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 DHX33Q9H6R0 707 aaKnown RBP33.93■■■■□ 3.02
CTDNEP1-206ENST00000571409 SLITRK3O94933 977 aa33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 ITGB1P05556 798 aa33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 RFC5P40937 340 aa33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 ECHDC2Q86YB7 292 aa33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 FAM184AQ8NB25 1140 aa33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 NECAB3Q96P71 396 aaPredicted RBP33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 MTMR9Q96QG7 549 aa33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 INO80BQ9C086 356 aaPredicted RBP33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 BMP2KQ9NSY1 1161 aaPredicted RBP33.92■■■■□ 3.02
CTDNEP1-206ENST00000571409 ZBTB39O15060 712 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 KCNA5P22460 613 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 SFPQP23246 707 aaKnown RBP eCLIP33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 MCM7P33993 719 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 XKR9Q5GH70 373 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 FBXO18Q8NFZ0 1043 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 HCSTQ9UBK5 93 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 COL4A3BPQ9Y5P4 624 aa33.91■■■■□ 3.02
CTDNEP1-206ENST00000571409 RABEP1Q15276 862 aa33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 RNF169Q8NCN4 708 aa33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 SPPL3Q8TCT6 385 aa33.9■■■■□ 3.02
CTDNEP1-206ENST00000571409 TMEM143Q96AN5 459 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms