RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 ZSCAN20P17040 1043 aaPredicted RBP16.21■□□□□ 0.19
CIITA-205ENST00000571186 HOXB8P17481 243 aaPredicted RBP16.21■□□□□ 0.19
CIITA-205ENST00000571186 PBX3P40426 434 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 NLRP11P59045 1033 aaKnown RBP16.21■□□□□ 0.19
CIITA-205ENST00000571186 KCNC3Q14003 757 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 LRRC55Q6ZSA7 311 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 ZNF713Q8N859 430 aaPredicted RBP16.21■□□□□ 0.19
CIITA-205ENST00000571186 RASGRP4Q8TDF6 673 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 ZNF558Q96NG5 402 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 SPG21Q9NZD8 308 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 AKT3Q9Y243 479 aa16.21■□□□□ 0.19
CIITA-205ENST00000571186 MAFBQ9Y5Q3 323 aaPredicted RBP16.21■□□□□ 0.19
CIITA-205ENST00000571186 SPTBN4Q9H254 2564 aa16.21■□□□□ 0.18
CIITA-205ENST00000571186 RIF1Q5UIP0 2472 aaKnown RBP16.2■□□□□ 0.18
CIITA-205ENST00000571186 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 PSAPP07602 524 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 PSMA5P28066 241 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 CDC27P30260 824 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 CLCN3P51790 818 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
CIITA-205ENST00000571186 EFCAB12Q6NXP0 572 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 RNF169Q8NCN4 708 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 ATOH1Q92858 354 aaPredicted RBP16.2■□□□□ 0.18
CIITA-205ENST00000571186 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
CIITA-205ENST00000571186 ZSWIM6Q9HCJ5 1215 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
CIITA-205ENST00000571186 TBC1D22BQ9NU19 505 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 GABBR1Q9UBS5 961 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 NR2E1Q9Y466 385 aa16.2■□□□□ 0.18
CIITA-205ENST00000571186 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 MAGEB2O15479 319 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 CYP3A4P08684 503 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 TMOD1P28289 359 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 CA8P35219 290 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 PPM1AP35813 382 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 CES5AQ6NT32 575 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 ZNF668Q96K58 619 aaPredicted RBP16.19■□□□□ 0.18
CIITA-205ENST00000571186 RIPOR3Q96MK2 946 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 IRF2BPLQ9H1B7 796 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 RNF19AQ9NV58 838 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 CDH22Q9UJ99 828 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 CEP131Q9UPN4 1083 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 SAMM50Q9Y512 469 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 PCDHA10Q9Y5I2 948 aa16.19■□□□□ 0.18
CIITA-205ENST00000571186 GFRA3O60609 400 aa16.18■□□□□ 0.18
CIITA-205ENST00000571186 PDGFBP01127 241 aaPredicted RBP16.18■□□□□ 0.18
CIITA-205ENST00000571186 EIF4BP23588 611 aaKnown RBP16.18■□□□□ 0.18
CIITA-205ENST00000571186 ADD1P35611 737 aaKnown RBP16.18■□□□□ 0.18
CIITA-205ENST00000571186 TOB2Q14106 344 aaPredicted RBP16.18■□□□□ 0.18
CIITA-205ENST00000571186 SMAP1Q8IYB5 467 aaPredicted RBP16.18■□□□□ 0.18
CIITA-205ENST00000571186 LRRC43Q8N309 656 aa16.18■□□□□ 0.18
CIITA-205ENST00000571186 LRRC71Q8N4P6 559 aa16.18■□□□□ 0.18
CIITA-205ENST00000571186 MRPL43Q8N983 215 aaKnown RBP16.18■□□□□ 0.18
CIITA-205ENST00000571186 CASP10Q92851 521 aa16.18■□□□□ 0.18
CIITA-205ENST00000571186 AGXT2Q9BYV1 514 aa16.18■□□□□ 0.18
CIITA-205ENST00000571186 ADAMTS10Q9H324 1103 aa16.18■□□□□ 0.18
CIITA-205ENST00000571186 VPS13AQ96RL7 3174 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 H0Y858 1186 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 ADAMTS3O15072 1205 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 CXCL14O95715 111 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 METAP2P50579 478 aaKnown RBP eCLIP16.17■□□□□ 0.18
CIITA-205ENST00000571186 SETQ01105 290 aaPredicted RBP16.17■□□□□ 0.18
CIITA-205ENST00000571186 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
CIITA-205ENST00000571186 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
CIITA-205ENST00000571186 PRR16Q569H4 304 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 CRYGNQ8WXF5 182 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 FAM167AQ96KS9 214 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 SCLT1Q96NL6 688 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 FAM186AA6NE01 2351 aa16.17■□□□□ 0.18
CIITA-205ENST00000571186 WDR87Q6ZQQ6 2873 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 NT5C1B-RDH14C9J2C7 533 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 FGFR4P22455 802 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 ALDH7A1P49419 539 aaKnown RBP16.16■□□□□ 0.18
CIITA-205ENST00000571186 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
CIITA-205ENST00000571186 C8orf34Q49A92 452 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 CLLU1OSQ5K130 101 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 MCTP2Q6DN12 878 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 FBXL16Q8N461 479 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 HELQQ8TDG4 1101 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 SNX27Q96L92 541 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 TM6SF1Q9BZW5 370 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 ADAM7Q9H2U9 754 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 POMKQ9H5K3 350 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 HCFC2Q9Y5Z7 792 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
CIITA-205ENST00000571186 A0A0U1RQF3 1178 aa16.15■□□□□ 0.18
CIITA-205ENST00000571186 C2orf71A6NGG8 1288 aa16.15■□□□□ 0.18
CIITA-205ENST00000571186 C2CD4DB7Z1M9 353 aa16.15■□□□□ 0.18
CIITA-205ENST00000571186 CLASP2O75122 1294 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms