RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 WDR48Q8TAF3 677 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 OXSMQ9NWU1 459 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 PPP4R1LQ9P1A2 415 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 Q9UFV3 132 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 FYCO1Q9BQS8 1478 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 KDM6BO15054 1643 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 NEO1Q92859 1461 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 A0A087X0B3 334 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 K7ESM1 405 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 GAS7O60861 476 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 PTX3P26022 381 aaPredicted RBP5.73□□□□□ -1.49
NUP88-202ENST00000570937 MOGSQ13724 837 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 PCBP1Q15365 356 aaKnown RBP eCLIP5.73□□□□□ -1.49
NUP88-202ENST00000570937 ZMAT1Q5H9K5 638 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 SLFN13Q68D06 897 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 GRAMD4Q6IC98 578 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 GPR155Q7Z3F1 870 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 TTC9BQ8N6N2 239 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 EFHBQ8N7U6 833 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
NUP88-202ENST00000570937 MAML3Q96JK9 1138 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 ELF4Q99607 663 aaPredicted RBP5.73□□□□□ -1.49
NUP88-202ENST00000570937 IFT57Q9NWB7 429 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 ABCA9Q8IUA7 1624 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 TROQ12816 1431 aaPredicted RBP5.73□□□□□ -1.49
NUP88-202ENST00000570937 ZNF536O15090 1300 aa5.73□□□□□ -1.49
NUP88-202ENST00000570937 UBA6A0AVT1 1052 aaPredicted RBP5.72□□□□□ -1.49
NUP88-202ENST00000570937 ZNF891A8MT65 544 aaPredicted RBP5.72□□□□□ -1.49
NUP88-202ENST00000570937 HMGCRP04035 888 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 SLC9A1P19634 815 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 ADCY8P40145 1251 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 GYS2P54840 703 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 ROM1Q03395 351 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 ADCY1Q08828 1119 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 NFYCQ13952 458 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 SEPT7Q16181 437 aaKnown RBP5.72□□□□□ -1.49
NUP88-202ENST00000570937 SPATS1Q496A3 300 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 TTC38Q5R3I4 469 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 SDE2Q6IQ49 451 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 ESRP1Q6NXG1 681 aaKnown RBP5.72□□□□□ -1.49
NUP88-202ENST00000570937 GLB1LQ6UWU2 654 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 ZZZ3Q8IYH5 903 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 BCL6BQ8N143 479 aaPredicted RBP5.72□□□□□ -1.49
NUP88-202ENST00000570937 NXPE1Q8N323 547 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 SAMD11Q96NU1 681 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 MEGF9Q9H1U4 602 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 MAPRE3Q9UPY8 281 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 PTPN22Q9Y2R2 807 aa5.72□□□□□ -1.49
NUP88-202ENST00000570937 CDK13Q14004 1512 aaKnown RBP5.72□□□□□ -1.49
NUP88-202ENST00000570937 FANCAO15360 1455 aa5.71□□□□□ -1.49
NUP88-202ENST00000570937 MTUS2Q5JR59 1369 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 ARAP3Q8WWN8 1544 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 KCNQ1P51787 676 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 SLC6A3Q01959 620 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 MAP3K12Q12852 859 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 LARP4Q71RC2 724 aaKnown RBP eCLIP5.71□□□□□ -1.5
NUP88-202ENST00000570937 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 H2AFY2Q9P0M6 372 aaPredicted RBP5.71□□□□□ -1.5
NUP88-202ENST00000570937 PLCH2O75038 1416 aa5.71□□□□□ -1.5
NUP88-202ENST00000570937 KIF14Q15058 1648 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.7□□□□□ -1.5
NUP88-202ENST00000570937 NPEPPSL1A6NEC2 478 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 GPR42O15529 346 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 PDE8AO60658 829 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 RGS3P49796 1198 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 SCNN1BP51168 640 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 SMAD3P84022 425 aaKnown RBP5.7□□□□□ -1.5
NUP88-202ENST00000570937 OCRLQ01968 901 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 LRRC32Q14392 662 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 ZNF568Q3ZCX4 644 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 GPR158Q5T848 1215 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 AGBL4Q5VU57 503 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 SLFN12LQ6IEE8 588 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 LIMS2Q7Z4I7 341 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 PHYKPLQ8IUZ5 450 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 DNERQ8NFT8 737 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 CHTF18Q8WVB6 975 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 MSL2Q9HCI7 577 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 TOMM22Q9NS69 142 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 THG1LQ9NWX6 298 aaKnown RBP5.7□□□□□ -1.5
NUP88-202ENST00000570937 CDC42EP3Q9UKI2 254 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 VWA7Q9Y334 891 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 AKNAQ7Z591 1439 aa5.7□□□□□ -1.5
NUP88-202ENST00000570937 PCF11O94913 1555 aaKnown RBP5.7□□□□□ -1.5
NUP88-202ENST00000570937 PPRC1Q5VV67 1664 aaKnown RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 CFAP74Q9C0B2 1584 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 VPS8Q8N3P4 1428 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 TGM5O43548 720 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 LSSP48449 732 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
NUP88-202ENST00000570937 RRADP55042 308 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 BCAR1P56945 870 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 PHC1P78364 1004 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 MYBPC3Q14896 1274 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 PCOLCEQ15113 449 aa5.69□□□□□ -1.5
NUP88-202ENST00000570937 RNF151Q2KHN1 245 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms