RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 NPY5RQ15761 445 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 Q4G0T1 1027 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 LRCH2Q5VUJ6 765 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 B3GNT9Q6UX72 402 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 ZNF710Q8N1W2 664 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 SMRP1Q8NCR6 262 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 MICAL1Q8TDZ2 1067 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
NDE1-203ENST00000570727 CEP89Q96ST8 783 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 TEKT3Q9BXF9 490 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 TLR9Q9NR96 1032 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 BARX2Q9UMQ3 279 aaPredicted RBP16.68■□□□□ 0.26
NDE1-203ENST00000570727 PCDHA4Q9UN74 947 aa16.68■□□□□ 0.26
NDE1-203ENST00000570727 FSCN2O14926 492 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
NDE1-203ENST00000570727 CHMP2AO43633 222 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 GPC3P51654 580 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
NDE1-203ENST00000570727 ECHDC2Q86YB7 292 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 RNF135Q8IUD6 432 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 THNSL1Q8IYQ7 743 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 VN1R2Q8NFZ6 395 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 MAP7D2Q96T17 732 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 POP1Q99575 1024 aaKnown RBP16.67■□□□□ 0.26
NDE1-203ENST00000570727 NIFKQ9BYG3 293 aaKnown RBP16.67■□□□□ 0.26
NDE1-203ENST00000570727 TMEM117Q9H0C3 514 aa16.67■□□□□ 0.26
NDE1-203ENST00000570727 TDP2O95551 362 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 DARSP14868 501 aaKnown RBP16.66■□□□□ 0.26
NDE1-203ENST00000570727 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
NDE1-203ENST00000570727 LAG3P18627 525 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 FGFR4P22455 802 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 JAK3P52333 1124 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 DRP2Q13474 957 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 DUSP6Q16828 381 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
NDE1-203ENST00000570727 PDE12Q6L8Q7 609 aaKnown RBP16.66■□□□□ 0.26
NDE1-203ENST00000570727 TRIM22Q8IYM9 498 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 BLIDQ8IZY5 108 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 RDM1Q8NG50 284 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 MBOAT7Q96N66 472 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 MUTYHQ9UIF7 546 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 LZTS1Q9Y250 596 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
NDE1-203ENST00000570727 TECTAO75443 2155 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 IGKV6-21A0A0C4DH24 114 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 TMEM150BA6NC51 233 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 LOC730098B7Z3J9 87 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 CSDE1O75534 798 aaKnown RBP16.65■□□□□ 0.26
NDE1-203ENST00000570727 DEXIO95424 95 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 TBC1D8BQ0IIM8 1120 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 KCNC3Q14003 757 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 CLLU1OSQ5K130 101 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 MIER3Q7Z3K6 550 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 ZNF598Q86UK7 904 aaKnown RBP16.65■□□□□ 0.26
NDE1-203ENST00000570727 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 ETNPPLQ8TBG4 499 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
NDE1-203ENST00000570727 C22orf23Q9BZE7 217 aa16.65■□□□□ 0.26
NDE1-203ENST00000570727 USP15Q9Y4E8 981 aaPredicted RBP16.65■□□□□ 0.26
NDE1-203ENST00000570727 HOXA2O43364 376 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 ATF7P17544 494 aaPredicted RBP16.64■□□□□ 0.25
NDE1-203ENST00000570727 PBX3P40426 434 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 MTERF2Q49AM1 385 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 XKR3Q5GH77 459 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 MOXD1Q6UVY6 613 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 TMEM184AQ6ZMB5 413 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
NDE1-203ENST00000570727 SH2D3AQ9BRG2 576 aa16.64■□□□□ 0.25
NDE1-203ENST00000570727 ZNF318Q5VUA4 2279 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 CPLX1O14810 134 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 EOMESO95936 686 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 STK3Q13188 491 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 CBX2Q14781 532 aaPredicted RBP16.63■□□□□ 0.25
NDE1-203ENST00000570727 PLPP4Q5VZY2 271 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 HFE2Q6ZVN8 426 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 NLRP7Q8WX94 980 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 SUSD6Q92537 303 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 EDAQ92838 391 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 S1PR5Q9H228 398 aa16.63■□□□□ 0.25
NDE1-203ENST00000570727 SEPT9Q9UHD8 586 aaPredicted RBP16.63■□□□□ 0.25
NDE1-203ENST00000570727 PUF60Q9UHX1 559 aaKnown RBP16.63■□□□□ 0.25
NDE1-203ENST00000570727 A0A087WZ62 844 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 DDX11L8A8MPP1 907 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 HIDE1A8MVS5 230 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 EML1O00423 815 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
NDE1-203ENST00000570727 ANO5Q75V66 913 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 FAM177A1Q8N128 213 aaPredicted RBP16.62■□□□□ 0.25
NDE1-203ENST00000570727 RNF169Q8NCN4 708 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 ZNF558Q96NG5 402 aa16.62■□□□□ 0.25
NDE1-203ENST00000570727 TCF25Q9BQ70 676 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms