RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 LRCH2Q5VUJ6 765 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 MCTP2Q6DN12 878 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 ABI1Q8IZP0 508 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 CCDC148Q8NFR7 591 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 BICD2Q8TD16 824 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 TBCKQ8TEA7 893 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 FBXL18Q96ME1 805 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 CASD1Q96PB1 797 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 TCF25Q9BQ70 676 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 TEKT3Q9BXF9 490 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 RNF26Q9BY78 433 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 ENTPD7Q9NQZ7 604 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 NRBP2Q9NSY0 501 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 CDH22Q9UJ99 828 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 HIDE1A8MVS5 230 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 NT5C1B-RDH14C9J2C7 533 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 FSCN2O14926 492 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 IFNAR1P17181 557 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 LAG3P18627 525 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 EIF4BP23588 611 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 PSMA5P28066 241 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 CA8P35219 290 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 GPC3P51654 580 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 UBE3AQ05086 875 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 STK3Q13188 491 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 TOB2Q14106 344 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 DUSP6Q16828 381 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 HERC4Q5GLZ8 1057 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 CLLU1OSQ5K130 101 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 KCNT2Q6UVM3 1135 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 ECHDC2Q86YB7 292 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 LINC01465Q8N7H1 131 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 NLRP7Q8WX94 980 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 MRPS27Q92552 414 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 SLC5A5Q92911 643 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 FAM167AQ96KS9 214 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 AIFM3Q96NN9 605 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 AGXT2Q9BYV1 514 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM117Q9H0C3 514 aa9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 ELAC1Q9H777 363 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 PUF60Q9UHX1 559 aaKnown RBP9.71□□□□□ -0.86
CTDNEP1-203ENST00000570385 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 LOC730098B7Z3J9 87 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 PSMD10O75832 226 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 DARSP14868 501 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 TECP42680 631 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 USP11P51784 963 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 JAK3P52333 1124 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 SSRP1Q08945 709 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 RUFY3Q7L099 469 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 MIER3Q7Z3K6 550 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMC7Q7Z402 723 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 KSR1Q8IVT5 923 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 LRRC43Q8N309 656 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 HELQQ8TDG4 1101 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 EDAQ92838 391 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 LPPQ93052 612 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZNF558Q96NG5 402 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 RIT2Q99578 217 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 PHF7Q9BWX1 381 aaPredicted RBP9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 PCDHA4Q9UN74 947 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 NID2Q14112 1375 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 MYO10Q9HD67 2058 aa9.7□□□□□ -0.86
CTDNEP1-203ENST00000570385 A0A087WZ62 844 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 TMEM221A6NGB7 291 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 M0R296 226 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 CPLX1O14810 134 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 HOXA2O43364 376 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 REC8O95072 547 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 CACNA1HO95180 2353 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 WEE2P0C1S8 567 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 ATF7P17544 494 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 SFNP31947 248 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 PLCB3Q01970 1234 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 NHLH1Q02575 133 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 KRT17Q04695 432 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 TARBP2Q15633 366 aaKnown RBP9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 INF2Q27J81 1249 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 IER5LQ5T953 404 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 PLA2G4FQ68DD2 849 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 ANKRD54Q6NXT1 300 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 SYCE2Q6PIF2 218 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 TRIM67Q6ZTA4 783 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 BLIDQ8IZY5 108 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 FBXL16Q8N461 479 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 PBXIP1Q96AQ6 731 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 MFSD14AQ96MC6 490 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 FDXACB1Q9BRP7 624 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 S1PR5Q9H228 398 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 SH3GLB2Q9NR46 395 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 BMP2KQ9NSY1 1161 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-203ENST00000570385 SPG21Q9NZD8 308 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms