RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CCDC62Q6P9F0 684 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 AOPEPQ8N6M6 819 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
GDE1-205ENST00000569899 SCFD2Q8WU76 684 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 COPS5Q92905 334 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 DNAJC19Q96DA6 116 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 APBA2Q99767 749 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 TINF2Q9BSI4 451 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 RUSC1Q9BVN2 902 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 ZSWIM4Q9H7M6 989 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 FLRT1Q9NZU1 646 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 GABBR1Q9UBS5 961 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 GDAQ9Y2T3 454 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 RHOBTB3O94955 611 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 PSAPP07602 524 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 HOXC6P09630 235 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 TXNP10599 105 aaKnown RBP11.11□□□□□ -0.63
GDE1-205ENST00000569899 TGFB3P10600 412 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 PSMC5P62195 406 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 LACTBP83111 547 aaPredicted RBP11.11□□□□□ -0.63
GDE1-205ENST00000569899 CAP1Q01518 475 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 NNTQ13423 1086 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 TTLL4Q14679 1199 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 KCNB1Q14721 858 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 GJC2Q5T442 439 aaPredicted RBP11.11□□□□□ -0.63
GDE1-205ENST00000569899 MIS18BP1Q6P0N0 1132 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 ABHD15Q6UXT9 468 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 UNC13DQ70J99 1090 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 GIMAP8Q8ND71 665 aaPredicted RBP11.11□□□□□ -0.63
GDE1-205ENST00000569899 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
GDE1-205ENST00000569899 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 EXOC1Q9NV70 894 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
GDE1-205ENST00000569899 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
GDE1-205ENST00000569899 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 ZNF862O60290 1169 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 TRPA1O75762 1119 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 LYPLA2O95372 231 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 KRT18P05783 430 aaKnown RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 IDEP14735 1019 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 RGS2P41220 211 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 ADCYAP1R1P41586 468 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 PSMC4P43686 418 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 FCGRTP55899 365 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 PRKCEQ02156 737 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 COASYQ13057 564 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 IQCB1Q15051 598 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 ZNF658Q5TYW1 1059 aaPredicted RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 SWSAP1Q6NVH7 229 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 TRMT1LQ7Z2T5 733 aaKnown RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 DHX40Q8IX18 779 aaKnown RBP11.1□□□□□ -0.63
GDE1-205ENST00000569899 C4orf19Q8IY42 314 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 KCTD17Q8N5Z5 321 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 REEP2Q9BRK0 252 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 LRRC27Q9C0I9 530 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 MLXIPQ9HAP2 919 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 RNF186Q9NXI6 227 aa11.1□□□□□ -0.63
GDE1-205ENST00000569899 GSTTP1A0A1W2PQM5 241 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 RBM47A0AV96 593 aaKnown RBP11.09□□□□□ -0.63
GDE1-205ENST00000569899 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 RSPH10B2B2RC85 870 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 ERVH48-1M5A8F1 160 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 BACH1O14867 736 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 ADCY6O43306 1168 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 ATG7O95352 703 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 CAVIN2O95810 425 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 SKIP12755 728 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
GDE1-205ENST00000569899 YWHABP31946 246 aaKnown RBP11.09□□□□□ -0.63
GDE1-205ENST00000569899 MAP2K2P36507 400 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 RARRES1P49788 294 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 ARHGAP1Q07960 439 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 EHHADHQ08426 723 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 UTP14CQ5TAP6 766 aaKnown RBP11.09□□□□□ -0.63
GDE1-205ENST00000569899 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 DHX37Q8IY37 1157 aaKnown RBP11.09□□□□□ -0.63
GDE1-205ENST00000569899 CCDC116Q8IYX3 515 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
GDE1-205ENST00000569899 MLKLQ8NB16 471 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 ATP6V0A1Q93050 837 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
GDE1-205ENST00000569899 PCYT2Q99447 389 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 BPIFA3Q9BQP9 254 aa11.09□□□□□ -0.63
GDE1-205ENST00000569899 SH2D3AQ9BRG2 576 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms