RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ZKSCAN5Q9Y2L8 839 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 SPO11Q9Y5K1 396 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 NUP153P49790 1475 aaKnown RBP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 SAMD9Q5K651 1589 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 CFAP74Q9C0B2 1584 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 LRRIQ1Q96JM4 1722 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 LTBP4Q8N2S1 1624 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 EFCAB5A4FU69 1503 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 CDK13Q14004 1512 aaKnown RBP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 FHOD3Q2V2M9 1422 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 POGZQ7Z3K3 1410 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 PHLDB1Q86UU1 1377 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 PLEKHD1A6NEE1 506 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 CNOT4O95628 575 aaKnown RBP4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 PLATP00750 562 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 CYP17A1P05093 508 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 ITGB3P05106 788 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 SYN1P17600 705 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 ADCYAP1R1P41586 468 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 ETV4P43268 484 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 KCNQ1P51787 676 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 RRADP55042 308 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 SLC6A3Q01959 620 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 NOLC1Q14978 699 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 EIF4HQ15056 248 aaKnown RBP4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 TMEM200BQ69YZ2 307 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 LIMS2Q7Z4I7 341 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 RALYLQ86SE5 291 aaKnown RBP4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 REXO1L1PQ8IX06 675 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 BCL6BQ8N143 479 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 PPM1KQ8N3J5 372 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 FOXB1Q99853 325 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZMAT4Q9H898 229 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 IFT57Q9NWB7 429 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 MAGEL2Q9UJ55 1249 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 ARHGEF12Q9NZN5 1544 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 SCAPERQ9BY12 1400 aa4.71□□□□□ -1.66
HMGB1P6-201ENST00000569046 UBA6A0AVT1 1052 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 B8ZZF3 427 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 LAMTOR5O43504 91 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 GAS7O60861 476 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 CUTAO60888 179 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 CELA3BP08861 270 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 APEX1P27695 318 aaKnown RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 EPHB4P54760 987 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 PPP2CBP62714 309 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 PPP2CAP67775 309 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 PLP2Q04941 152 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 USP10Q14694 798 aaKnown RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 MYBPC3Q14896 1274 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 EPHA7Q15375 998 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 TBR1Q16650 682 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 RNF151Q2KHN1 245 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 GRAMD4Q6IC98 578 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 OTOP2Q7RTS6 562 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 RNF180Q86T96 592 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 THNSL2Q86YJ6 484 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 UBR7Q8N806 425 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 CALML6Q8TD86 181 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 LEO1Q8WVC0 666 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 RTF1Q92541 710 aaKnown RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 MAML3Q96JK9 1138 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 GPR101Q96P66 508 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 CARD11Q9BXL7 1154 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 KIAA1683Q9H0B3 1180 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 MEGF9Q9H1U4 602 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 SEMA4AQ9H3S1 761 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 MS4A5Q9H3V2 200 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 TOMM22Q9NS69 142 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 SPTLC3Q9NUV7 552 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 FBXO10Q9UK96 956 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 SLC4A7Q9Y6M7 1214 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 KIF14Q15058 1648 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 SETD1BQ9UPS6 1966 aaKnown RBP4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZMYM4Q5VZL5 1548 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 NCANO14594 1321 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZNF536O15090 1300 aa4.7□□□□□ -1.66
HMGB1P6-201ENST00000569046 ATP10AO60312 1499 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 CDC42BPBQ9Y5S2 1711 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 A0A0G2JNJ9 132 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 LCHNA4D1U4 455 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 PRRG2O14669 202 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 GPR42O15529 346 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 HMGCRP04035 888 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 BUD31P41223 144 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 STAT5BP51692 787 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 ANTXR2P58335 489 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 SMAD3P84022 425 aaKnown RBP4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 PCOLCEQ15113 449 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZNF827Q17R98 1081 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 TTC38Q5R3I4 469 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 TRIM68Q6AZZ1 485 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 SLFN12LQ6IEE8 588 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 UNQ6494/PRO21346Q6UXR6 183 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 ARHGEF18Q6ZSZ5 1173 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 PLEKHH3Q7Z736 793 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 AFAP1Q8N556 730 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 EFHBQ8N7U6 833 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 Q9UFV3 132 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms