RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MRPL9Q9BYD2 267 aaKnown RBP17.83■□□□□ 0.44
HERPUD1-215ENST00000568676 C6orf50Q9HD87 102 aa17.83■□□□□ 0.44
HERPUD1-215ENST00000568676 DACT1Q9NYF0 836 aa17.83■□□□□ 0.44
HERPUD1-215ENST00000568676 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
HERPUD1-215ENST00000568676 AKT3Q9Y243 479 aa17.83■□□□□ 0.44
HERPUD1-215ENST00000568676 KMT2EQ8IZD2 1858 aa17.83■□□□□ 0.44
HERPUD1-215ENST00000568676 A0A0U1RQF3 1178 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 WDR64B1ANS9 1081 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 NLRP11P59045 1033 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 APOBRQ0VD83 1088 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 MTMR3Q13615 1198 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 EFCAB12Q6NXP0 572 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 LRRC55Q6ZSA7 311 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 ECHDC2Q86YB7 292 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 LINC01465Q8N7H1 131 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 MRPL43Q8N983 215 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 PHOX2BQ99453 314 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 ADAM7Q9H2U9 754 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 ADAMTS10Q9H324 1103 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 GABBR1Q9UBS5 961 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 SORCS3Q9UPU3 1222 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 SAMM50Q9Y512 469 aa17.82■□□□□ 0.44
HERPUD1-215ENST00000568676 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 HIDE1A8MVS5 230 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 CIITAP33076 1130 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 MTHFRP42898 656 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 CLCN3P51790 818 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 GIT2Q14161 759 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 BICD2Q8TD16 824 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 PPP1R16BQ96T49 567 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 RNF19AQ9NV58 838 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 HCFC2Q9Y5Z7 792 aa17.81■□□□□ 0.44
HERPUD1-215ENST00000568676 OATP04181 439 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 SFNP31947 248 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 ALDH7A1P49419 539 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 VCPP55072 806 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 LLGL2Q6P1M3 1020 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 DZANK1Q9NVP4 752 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 EVPLQ92817 2033 aa17.8■□□□□ 0.44
HERPUD1-215ENST00000568676 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 ZDBF2Q9HCK1 2354 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 C2orf71A6NGG8 1288 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 GFRA3O60609 400 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 DARSP14868 501 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 CDC27P30260 824 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 METAP2P50579 478 aaKnown RBP eCLIP17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 GPC3P51654 580 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 PRR16Q569H4 304 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 KREMEN2Q8NCW0 462 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 ATOH1Q92858 354 aaPredicted RBP17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 TMEM169Q96HH4 297 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 SNX27Q96L92 541 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 SCLT1Q96NL6 688 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 RIT2Q99578 217 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
HERPUD1-215ENST00000568676 PROB1E7EW31 1015 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 SKIP12755 728 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 JAK3P52333 1124 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 POLGP54098 1239 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 FGD1P98174 961 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 BMP2KLQ5H9B9 411 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 CLLU1OSQ5K130 101 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 ZNF598Q86UK7 904 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 LRRC71Q8N4P6 559 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 TMEM87AQ8NBN3 555 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 CCDC148Q8NFR7 591 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 RDM1Q8NG50 284 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 DISC1Q9NRI5 854 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 USTQ9Y2C2 406 aa17.78■□□□□ 0.44
HERPUD1-215ENST00000568676 PRPF3O43395 683 aaKnown RBP17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 USP11P51784 963 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 AKAP17AQ02040 695 aaKnown RBP17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 PRKCEQ02156 737 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 TBC1D8BQ0IIM8 1120 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 ZDHHC14Q8IZN3 488 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 RNF169Q8NCN4 708 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 NLRP7Q8WX94 980 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 APOL5Q9BWW9 433 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 INO80BQ9C086 356 aaPredicted RBP17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 POMKQ9H5K3 350 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.44
HERPUD1-215ENST00000568676 NID2Q14112 1375 aa17.77■□□□□ 0.43
HERPUD1-215ENST00000568676 ZNF862O60290 1169 aa17.76■□□□□ 0.43
HERPUD1-215ENST00000568676 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-215ENST00000568676 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
HERPUD1-215ENST00000568676 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-215ENST00000568676 PBX3P40426 434 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms